RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GBP2P32456 591 aaPredicted RBP17.09■□□□□ 0.33
SEC13-210ENST00000428626 NPTX2P47972 431 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 PEX3P56589 373 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
SEC13-210ENST00000428626 TDGQ13569 410 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 PIK3R5Q8WYR1 880 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 IFT74Q96LB3 600 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
SEC13-210ENST00000428626 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 TTPALQ9BTX7 342 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 PRKD2Q9BZL6 878 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 DUSP12Q9UNI6 340 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 ABLIM1O14639 778 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 HIP1RO75146 1068 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 ZMYND10O75800 440 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 EFNA5P52803 228 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 PSMD5Q16401 504 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
SEC13-210ENST00000428626 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 RSPO2Q6UXX9 243 aaPredicted RBP17.08■□□□□ 0.32
SEC13-210ENST00000428626 CYP26C1Q6V0L0 522 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 ACO2Q99798 780 aaKnown RBP17.08■□□□□ 0.32
SEC13-210ENST00000428626 CDT1Q9H211 546 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 ZDHHC7Q9NXF8 308 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 ARHGAP28Q9P2N2 729 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 NOTCH4Q99466 2003 aa17.08■□□□□ 0.32
SEC13-210ENST00000428626 VPS13AQ96RL7 3174 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 K7ERI5 159 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 CLCNKBP51801 687 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 NTHL1P78549 312 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
SEC13-210ENST00000428626 IGSF9Q9P2J2 1179 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 DPP7Q9UHL4 492 aa17.07■□□□□ 0.32
SEC13-210ENST00000428626 RIF1Q5UIP0 2472 aaKnown RBP17.07■□□□□ 0.32
SEC13-210ENST00000428626 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 KRBA1A5PL33 1030 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 CCDC169A6NNP5 214 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 SFI1A8K8P3 1242 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 I3L4J1 428 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 FGFR3P22607 806 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 PRPHP41219 470 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 OSTNP61366 133 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 CREMQ03060 361 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 UPP1Q16831 310 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 XKR4Q5GH76 650 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 ALKAL1Q6UXT8 129 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 GET4Q7L5D6 327 aaPredicted RBP17.06■□□□□ 0.32
SEC13-210ENST00000428626 SLC44A3Q8N4M1 653 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 FLCNQ8NFG4 579 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 ATOH1Q92858 354 aaPredicted RBP17.06■□□□□ 0.32
SEC13-210ENST00000428626 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
SEC13-210ENST00000428626 PIDD1Q9HB75 910 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
SEC13-210ENST00000428626 CFAP54Q96N23 3096 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 B3GAT3O94766 335 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 CFHP08603 1231 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 LAMP2P13473 410 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 PROZP22891 400 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 TKTP29401 623 aaKnown RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 GRM5P41594 1212 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 BRCC3P46736 316 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 CLCN5P51795 746 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 NUBP1P53384 320 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 ATP2C1P98194 919 aaPredicted RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 RAD51AP2Q09MP3 1159 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 RABEP1Q15276 862 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 KRT79Q5XKE5 535 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 ELMSAN1Q6PJG2 1045 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 DTHD1Q6ZMT9 781 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 GRASPQ7Z6J2 395 aaPredicted RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 SIX5Q8N196 739 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 TMEM130Q8N3G9 435 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 STAMQ92783 540 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 PLIN2Q99541 437 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 RPP25Q9BUL9 199 aaKnown RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
SEC13-210ENST00000428626 PTPRZ1P23471 2315 aaPredicted RBP17.05■□□□□ 0.32
SEC13-210ENST00000428626 ANHXE9PGG2 379 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 LAD1O00515 517 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 SLC16A4O15374 487 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 C8AP07357 584 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 AOC1P19801 751 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 OR1D2P34982 312 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 HTR4Q13639 388 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms