RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CCDC137Q6PK04 289 aaKnown RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 SYDE1Q6ZW31 735 aaPredicted RBP5.49□□□□□ -1.53
RIF1-203ENST00000428287 RIOX1Q9H6W3 641 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 IL1RAPL1Q9NZN1 696 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 ASAP1Q9ULH1 1129 aa5.49□□□□□ -1.53
RIF1-203ENST00000428287 USP17L12C9JPN9 530 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 USP17L21D6R901 530 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CCDC22O60826 627 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 RFX1P22670 979 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 RCN1Q15293 331 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 WDR72Q3MJ13 1102 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 TTC27Q6P3X3 843 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 KRT25Q7Z3Z0 450 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SLC9A9Q8IVB4 645 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 KBTBD2Q8IY47 623 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 FGD4Q96M96 766 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 TGS1Q96RS0 853 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 IL17RBQ9NRM6 502 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SLC4A4Q9Y6R1 1079 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 RAD21O60216 631 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SLC9A1P19634 815 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 EPHB2P29323 1055 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 DNAJC3Q13217 504 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 STAT4Q14765 748 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 ARSHQ5FYA8 562 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 ACBD5Q5T8D3 534 aaPredicted RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 MARK2Q7KZI7 788 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 KCNK18Q7Z418 384 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 LMO3Q8TAP4 145 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SDR42E1Q8WUS8 393 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CALML4Q96GE6 196 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 ARMT1Q9H993 441 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 STK24Q9Y6E0 443 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 NUMBLQ9Y6R0 609 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 MAGEC1O60732 1142 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 ATP2C2O75185 946 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 ATP6V1G1O75348 118 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 ASLP04424 464 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 YY1P25490 414 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 C3orf62Q6ZUJ4 267 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 REXO1Q8N1G1 1221 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 FAM133AQ8N9E0 248 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SCG3Q8WXD2 468 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 HAS1Q92839 578 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 PCMTD1Q96MG8 357 aaPredicted RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 AGBL1Q96MI9 1066 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 NLRP4Q96MN2 994 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CATSPER2Q96P56 530 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 BTBD9Q96Q07 612 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CADM1Q9BY67 442 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 DCP1AQ9NPI6 582 aaPredicted RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 BARX2Q9UMQ3 279 aaPredicted RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 NAALADL1Q9UQQ1 740 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SNX24Q9Y343 169 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 FSCN2O14926 492 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 PDE8AO60658 829 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CLK2P49760 499 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 SERPINB8P50452 374 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 EPHA7Q15375 998 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 VSIG1Q86XK7 387 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 KRT35Q92764 455 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 DHX36Q9H2U1 1008 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 DMAC2Q9NW81 257 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 KANSL3Q9P2N6 904 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 TRIM64BA6NI03 449 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 PDXKO00764 312 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 XRCC5P13010 732 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 TTLL12Q14166 644 aaPredicted RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 SPARCL1Q14515 664 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 PIP4K2CQ8TBX8 421 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SKA1Q96BD8 255 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 FNBP1Q96RU3 617 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 C1orf21Q9H246 121 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CCDC9Q9Y3X0 531 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 UMODL1Q5DID0 1318 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 KANSL1LA0AUZ9 987 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 RCN2Q14257 317 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SLC13A5Q86YT5 568 aaPredicted RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 CYP4X1Q8N118 509 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 TRIM51Q9BSJ1 452 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 TRAIPQ9BWF2 469 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CNTN3Q9P232 1028 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 HAO1Q9UJM8 370 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 DBR1Q9UK59 544 aaKnown RBP5.48□□□□□ -1.53
RIF1-203ENST00000428287 STK38LQ9Y2H1 464 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 QSER1Q2KHR3 1735 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SPATA31A5Q5VU36 1347 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SPATA31A6Q5VVP1 1343 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 SPATA31A7Q8IWB4 1347 aa5.48□□□□□ -1.53
RIF1-203ENST00000428287 CASQ2O14958 399 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 DHRS4L1P0CG22 281 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CDK4P11802 303 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SERPINB4P48594 390 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 XIAPP98170 497 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 AP1B1Q10567 949 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ECM1Q16610 540 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SLC4A8Q2Y0W8 1093 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ZC2HC1CQ53FD0 456 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 PGM2L1Q6PCE3 622 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CHSY1Q86X52 802 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms