RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 PLEKHA5Q9HAU0 1116 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 ATP11BQ9Y2G3 1177 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 EFNA5P52803 228 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 VCPP55072 806 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 TMPRSS15P98073 1019 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 GRIN1Q05586 938 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 CCDC144BQ3MJ40 725 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 ELMO3Q96BJ8 720 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 MS4A14Q96JA4 679 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 MOV10L1Q9BXT6 1211 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 UNC45AQ9H3U1 944 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 SEL1LQ9UBV2 794 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 DDTLA6NHG4 134 aaPredicted RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 SMIM24O75264 130 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 DGAT1O75907 488 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 CLCN3P51790 818 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 TPI1P60174 286 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 CDK17Q00537 523 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 IMPG1Q17R60 797 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 CYP4A22Q5TCH4 519 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 VPS39Q96JC1 886 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 TNIP3Q96KP6 325 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 MCEEQ96PE7 176 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 IP6K2Q9UHH9 426 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 BCL9O00512 1426 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 SPAG7O75391 227 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 PNMA6AP0CW24 399 aaPredicted RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 FDX1P10109 184 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 SCP2P22307 547 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 SOX10P56693 466 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 CAPRIN1Q14444 709 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 SRRM1Q8IYB3 904 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 EFHBQ8N7U6 833 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 CCDC197Q8NCU1 140 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 GLT1D1Q96MS3 346 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 FBXL5Q9UKA1 691 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 ZNF500O60304 480 aaPredicted RBP10.3□□□□□ -0.76
SNX13-203ENST00000428135 ARL4CP56559 192 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
SNX13-203ENST00000428135 TFDP2Q14188 446 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 GLB1LQ6UWU2 654 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 ZBED8Q8IZ13 594 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 DHX38Q92620 1227 aaKnown RBP10.3□□□□□ -0.76
SNX13-203ENST00000428135 PGBD4Q96DM1 585 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 TRIM9Q9C026 710 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 MAD2L2Q9UI95 211 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 IQANK1A0A1B0GTG1 560 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 A6NNZ2 444 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 KCNN4O15554 427 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 SLC37A4O43826 429 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 PPARGP37231 505 aaPredicted RBP10.3□□□□□ -0.76
SNX13-203ENST00000428135 PDIA2Q13087 525 aaKnown RBP10.3□□□□□ -0.76
SNX13-203ENST00000428135 TUBB8Q3ZCM7 444 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 TMEM259Q4ZIN3 620 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 MMS22LQ6ZRQ5 1243 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 PHLPP2Q6ZVD8 1323 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 RNF180Q86T96 592 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 WNT10BO00744 389 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 COPEO14579 308 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 TRAPPC3O43617 180 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 SLURP2P0DP57 97 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 PAPOLAP51003 745 aaKnown RBP10.3□□□□□ -0.76
SNX13-203ENST00000428135 STK4Q13043 487 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 SBK1Q52WX2 424 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 C2CD6Q53TS8 623 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 ATP11CQ8NB49 1132 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 ULK4Q96C45 1275 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 ERAP1Q9NZ08 941 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 BCAP29Q9UHQ4 241 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 REREQ9P2R6 1566 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 GPR75-ASB3A0A0A6YYF3 556 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 GOLGA8RI6L899 631 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 ZNF185O15231 689 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 CAP2P40123 477 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 RBBP7Q16576 425 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 SLC25A41Q8N5S1 370 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 NCLNQ969V3 563 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 AGPAT1Q99943 283 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 RASA4BC9J798 803 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 RASA4O43374 803 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 RPSAP08865 295 aaKnown RBP10.3□□□□□ -0.76
SNX13-203ENST00000428135 CCHCR1Q8TD31 782 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 CYTH2Q99418 400 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 SLC13A4Q9UKG4 626 aa10.3□□□□□ -0.76
SNX13-203ENST00000428135 RSPH10B2B2RC85 870 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 MAP3K6O95382 1288 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ITGB3P05106 788 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 RSPH10BP0C881 870 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 RBP5P82980 135 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 NUGGCQ68CJ6 796 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 GUF1Q8N442 669 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 PDCD7Q8N8D1 485 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 SLC7A14Q8TBB6 771 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SCFD2Q8WU76 684 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 TRIM10Q9UDY6 481 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SLC4A7Q9Y6M7 1214 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ANKRD65E5RJM6 399 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms