RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 NLRC5Q86WI3 1866 aa10.13□□□□□ -0.79
RFX3-AS1-202ENST00000427722 KIAA1671Q9BY89 1806 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CASTOR2A6NHX0 329 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 NRP1O14786 923 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MBTPS2O43462 519 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TBCAO75347 108 aaKnown RBP10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 NR1I2O75469 434 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 FAM13AO94988 1023 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CXCL14O95715 111 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ALDH2P05091 517 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 URODP06132 367 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TXLNAP40222 546 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 STRN3Q13033 797 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MCM6Q14566 821 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 STK38Q15208 465 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 PTPN14Q15678 1187 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 FOXD4L6Q3SYB3 417 aaPredicted RBP10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 GLRA4Q5JXX5 417 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 FOXD4L3Q6VB84 417 aaPredicted RBP10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ZBTB33Q86T24 672 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SMRP1Q8NCR6 262 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TMEM161BQ8NDZ6 487 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 LARP4BQ92615 738 aaKnown RBP10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 RABGGTAQ92696 567 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 HERC2P3Q9BVR0 1158 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 APOL5Q9BWW9 433 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CCSER1Q9C0I3 900 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CDT1Q9H211 546 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ZHX3Q9H4I2 956 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TMEM134Q9H6X4 195 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 C17orf75Q9HAS0 396 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ANKFY1Q9P2R3 1169 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TNFSF13BQ9Y275 285 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 USP15Q9Y4E8 981 aaPredicted RBP10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 HCFC2Q9Y5Z7 792 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 REV3LO60673 3130 aa10.12□□□□□ -0.79
RFX3-AS1-202ENST00000427722 FNDC1Q4ZHG4 1894 aaPredicted RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 K7ENM7 598 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 C2CD2LO14523 706 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 PTGESO14684 152 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CLASP2O75122 1294 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MAPTP10636 758 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 NASPP49321 788 aaPredicted RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SMTNP53814 917 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 OSTNP61366 133 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ZP2Q05996 745 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 COASYQ13057 564 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TUSC3Q13454 348 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SMAD2Q15796 467 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ARSHQ5FYA8 562 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ANKRD54Q6NXT1 300 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 FAM178BQ8IXR5 827 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 GJD3Q8N144 294 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CEP120Q8N960 986 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 KRI1Q8N9T8 703 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 HASPINQ8TF76 798 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CASP10Q92851 521 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 BICD1Q96G01 975 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ZNF396Q96N95 335 aaPredicted RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ACO2Q99798 780 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TCHPQ9BT92 498 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CCDC94Q9BW85 323 aaPredicted RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CXCL16Q9H2A7 254 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 PARVGQ9HBI0 331 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CD320Q9NPF0 282 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 LARSQ9P2J5 1176 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 STK17AQ9UEE5 414 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 CCDC39Q9UFE4 941 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ODF2LQ9ULJ1 636 aa10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SRPRBQ9Y5M8 271 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SPTBN5Q9NRC6 3674 aaKnown RBP10.11□□□□□ -0.79
RFX3-AS1-202ENST00000427722 KIF4AO95239 1232 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SOD2P04179 222 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MCF2P10911 925 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 GRM5P41594 1212 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 GLUD2P49448 558 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 YARSP54577 528 aaKnown RBP10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 PKP1Q13835 747 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 GIT2Q14161 759 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 NOLC1Q14978 699 aaKnown RBP eCLIP10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SLC39A14Q15043 492 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 RRAGBQ5VZM2 374 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 FUT10Q6P4F1 479 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SYCE2Q6PIF2 218 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MPZL3Q6UWV2 235 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 ADHFE1Q8IWW8 467 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MYCT1Q8N699 235 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 B3GALT6Q96L58 329 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 PAAF1Q9BRP4 392 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 COLEC11Q9BWP8 271 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 PTPRHQ9HD43 1115 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 MRPL17Q9NRX2 175 aaKnown RBP10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 TOPORSQ9NS56 1045 aaPredicted RBP10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 STK39Q9UEW8 545 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 IRAK3Q9Y616 596 aa10.1□□□□□ -0.79
RFX3-AS1-202ENST00000427722 SF3B1O75533 1304 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFX3-AS1-202ENST00000427722 H0YCG3 227 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms