RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 APOL6Q9BWW8 343 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 RSAD1Q9HA92 442 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 ARMCX3Q9UH62 379 aaPredicted RBP16.75■□□□□ 0.27
COL11A1-204ENST00000427239 SLC4A7Q9Y6M7 1214 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 CXCL8P10145 99 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 KRT13P13646 458 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 TPM4P67936 248 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 CYP24A1Q07973 514 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 XKR4Q5GH76 650 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 GLB1LQ6UWU2 654 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 LPPQ93052 612 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 BORCS6Q96GS4 357 aa16.74■□□□□ 0.27
COL11A1-204ENST00000427239 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 GOLGA6L19H0YKK7 550 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 PPP2R3AQ06190 1150 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 PSMD6Q15008 389 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 RASIP1Q5U651 963 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 ABI1Q8IZP0 508 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 TMC2Q8TDI7 906 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 PARD3BQ8TEW8 1205 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 FNBP1Q96RU3 617 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 UBE2OQ9C0C9 1292 aaKnown RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 SAMSN1Q9NSI8 373 aaKnown RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 CNTN3Q9P232 1028 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 KANSL3Q9P2N6 904 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 MAGEC2Q9UBF1 373 aaPredicted RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 MEIS3P2A8K0S8 358 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 LACTBL1A8MY62 500 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 INPPL1O15357 1258 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 OFD1O75665 1012 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 UPP2O95045 317 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 EEF1GP26641 437 aaKnown RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 BMP8BP34820 402 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 SPAG1Q07617 926 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 BFSP1Q12934 665 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 CDKAL1Q5VV42 579 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 LUZP1Q86V48 1076 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 NT5DC4Q86YG4 428 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 SNX27Q96L92 541 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 SLC9A7Q96T83 725 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 CXXC1Q9P0U4 656 aaPredicted RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 DERAQ9Y315 318 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.73■□□□□ 0.27
COL11A1-204ENST00000427239 TTC3P53804 2025 aa16.73■□□□□ 0.27
COL11A1-204ENST00000427239 DGKIO75912 1065 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 KCNE1P15382 129 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 CDK11BP21127 795 aaKnown RBP16.72■□□□□ 0.27
COL11A1-204ENST00000427239 VAMP7P51809 220 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 CLDN10P78369 228 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 DEFB103AP81534 67 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 CCDC127Q96BQ5 260 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
COL11A1-204ENST00000427239 RPS6KC1Q96S38 1066 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 GAD1Q99259 594 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 PDE11AQ9HCR9 933 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 KLK14Q9P0G3 267 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 C2CD2Q9Y426 696 aa16.72■□□□□ 0.27
COL11A1-204ENST00000427239 SMIM28A0A1B0GU29 152 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 ZNF18P17022 549 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 MLH1P40692 756 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 AP3M2P53677 418 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 SHHQ15465 462 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 TCP11X2Q5H9J9 407 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 ANKRD20A12PQ8NF67 263 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 URGCPQ8TCY9 931 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
COL11A1-204ENST00000427239 ZFP42Q96MM3 310 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 TMEM117Q9H0C3 514 aa16.71■□□□□ 0.27
COL11A1-204ENST00000427239 LRRC10BA6NIK2 292 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 KCNJ18B7U540 433 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 MEFVO15553 781 aaPredicted RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 STX10O60499 249 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 GJB5O95377 273 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 THP07101 528 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 DLATP10515 647 aaKnown RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 FGFR1P11362 822 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 PRKCSHP14314 528 aaPredicted RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 ATP2A2P16615 1042 aaKnown RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 WDR49Q8IV35 697 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 TRIM59Q8IWR1 403 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 HELQQ8TDG4 1101 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 MRPL9Q9BYD2 267 aaKnown RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 HSD3B7Q9H2F3 369 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 MICAL3Q7RTP6 2002 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 TULP1O00294 542 aaPredicted RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 XPOTO43592 962 aaKnown RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 TNNI1P19237 187 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms