RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SMIM10L2AP0DMW4 78 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 SMIM10L2BP0DMW5 78 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 MFSD10Q14728 455 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 KYAT1Q16773 422 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 KIAA0753Q2KHM9 967 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 TDRD10Q5VZ19 366 aaKnown RBP15.56■□□□□ 0.08
CDK3-201ENST00000425876 MFSD14CQ5VZR4 134 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 NFRKBQ6P4R8 1299 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 ALKBH5Q6P6C2 394 aaKnown RBP15.56■□□□□ 0.08
CDK3-201ENST00000425876 WDR49Q8IV35 697 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 PPM1KQ8N3J5 372 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 LMBR1Q8WVP7 490 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 KREMEN1Q96MU8 473 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 KATNAL1Q9BW62 490 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 SMIM35A0A1B0GVV1 85 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 HLA-DRAP01903 254 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 VTNP04004 478 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 MCF2P10911 925 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 HSPA8P11142 646 aaKnown RBP15.55■□□□□ 0.08
CDK3-201ENST00000425876 PSEN2P49810 448 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 WNT7BP56706 349 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 ADAM17P78536 824 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 PCBP1Q15365 356 aaKnown RBP eCLIP15.55■□□□□ 0.08
CDK3-201ENST00000425876 ZNF568Q3ZCX4 644 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 WDR44Q5JSH3 913 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 ZBTB33Q86T24 672 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 ZNF710Q8N1W2 664 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 OLIG1Q8TAK6 271 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 KAT6AQ92794 2004 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 CFHR5Q9BXR6 569 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 SETD4Q9NVD3 440 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 CDC23Q9UJX2 597 aa15.55■□□□□ 0.08
CDK3-201ENST00000425876 MACROD2A1Z1Q3 448 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 B4GALT5O43286 388 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 TRPA1O75762 1119 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 HARSP12081 509 aaKnown RBP15.54■□□□□ 0.08
CDK3-201ENST00000425876 CYBAP13498 195 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 NKX3-2P78367 333 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 FSCN1Q16658 493 aaKnown RBP15.54■□□□□ 0.08
CDK3-201ENST00000425876 PAPD7Q5XG87 772 aaKnown RBP15.54■□□□□ 0.08
CDK3-201ENST00000425876 EEF1DP3Q658K8 133 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 NOX5Q96PH1 765 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 ALS2CR12Q96Q35 445 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 CDT1Q9H211 546 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 C1orf112Q9NSG2 853 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 PTPRJQ12913 1337 aa15.54■□□□□ 0.08
CDK3-201ENST00000425876 B4GALT4O60513 344 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 IL18RAPO95256 599 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 VNN1O95497 513 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 H2AFZP0C0S5 128 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 TNFSF9P41273 254 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 PIK3CAP42336 1068 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 GJA9P57773 515 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 AMPD2Q01433 879 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 BIRC3Q13489 604 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 H2AFVQ71UI9 128 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 TRPV1Q8NER1 839 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 LNX1Q8TBB1 728 aaPredicted RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 NLRP7Q8WX94 980 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 DHX38Q92620 1227 aaKnown RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 KAT5Q92993 513 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 LENG1Q96BZ8 264 aaPredicted RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 ZNF668Q96K58 619 aaPredicted RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 AGPAT1Q99943 283 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 ADAMTS10Q9H324 1103 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 JRKLQ9Y4A0 524 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 A0A0A6YYK5 440 aaPredicted RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 MYL3P08590 195 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 CLTAP09496 248 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 TNFAIP3P21580 790 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 HOXC8P31273 242 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 CTCFP49711 727 aaPredicted RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 FLT3LGP49771 235 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 LBX1P52954 281 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 TRIB2Q92519 343 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 TATDN2Q93075 761 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 ARHGAP39Q9C0H5 1083 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 UPF3AQ9H1J1 476 aaKnown RBP15.53■□□□□ 0.08
CDK3-201ENST00000425876 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 SAGE1Q9NXZ1 904 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 SALL4Q9UJQ4 1053 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 GABRQQ9UN88 632 aa15.53■□□□□ 0.08
CDK3-201ENST00000425876 GPR25O00155 361 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 MOCS3O95396 460 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 GNAT1P11488 350 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 ARF4P18085 180 aaPredicted RBP15.52■□□□□ 0.07
CDK3-201ENST00000425876 TBXAS1P24557 533 aaPredicted RBP15.52■□□□□ 0.07
CDK3-201ENST00000425876 PURAQ00577 322 aaKnown RBP15.52■□□□□ 0.07
CDK3-201ENST00000425876 NCOA4Q13772 614 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 IFI16Q16666 785 aaKnown RBP15.52■□□□□ 0.07
CDK3-201ENST00000425876 WHAMMP3Q1A5X7 153 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 SEZ6Q53EL9 994 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 TRAPPC11Q7Z392 1133 aa15.52■□□□□ 0.07
CDK3-201ENST00000425876 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms