RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ASTN2O75129 1339 aaPredicted RBP13.91□□□□□ -0.18
COL12A1-205ENST00000425443 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 ELF1P32519 619 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 MTMR3Q13615 1198 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 DEFB132Q7Z7B7 95 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 MYLK4Q86YV6 388 aaPredicted RBP13.91□□□□□ -0.18
COL12A1-205ENST00000425443 C4orf19Q8IY42 314 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 SEMA4AQ9H3S1 761 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 KLC4Q9NSK0 619 aa13.91□□□□□ -0.18
COL12A1-205ENST00000425443 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CHN1P15882 459 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 RPL21P46778 160 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 USP4Q13107 963 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CBWD2Q8IUF1 395 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 PRELID2Q8N945 189 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 ZNF483Q8TF39 744 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 POMGNT1Q8WZA1 660 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 NAP1L3Q99457 506 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 STRA6Q9BX79 667 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 USP20Q9Y2K6 914 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 DAAM1Q9Y4D1 1078 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 ATP8B3O60423 1300 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 COL4A5P29400 1685 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SRRM3A6NNA2 597 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CYP26A1O43174 497 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SGPL1O95470 568 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CCND2P30279 289 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SSTR3P32745 418 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SLC29A2Q14542 456 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 AZI2Q9H6S1 392 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 PCDHA10Q9Y5I2 948 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SPOPO43791 374 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 FGFR4P22455 802 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CNGA1P29973 690 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 MFAP3P55082 362 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 GTF2BQ00403 316 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 KIF22Q14807 665 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 TBC1D25Q3MII6 688 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 ERMARDQ5T6L9 678 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 NBPF12Q5TAG4 269 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 PRAMEF18Q5VWM3 479 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CCDC121Q6ZUS5 278 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SH3GL3Q99963 347 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 TIPINQ9BVW5 301 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 TMEM117Q9H0C3 514 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 CARD9Q9H257 536 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 TOPORSQ9NS56 1045 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 SPATS2LQ9NUQ6 558 aaKnown RBP13.9□□□□□ -0.18
COL12A1-205ENST00000425443 GGA2Q9UJY4 613 aa13.9□□□□□ -0.18
COL12A1-205ENST00000425443 VWA5AO00534 786 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 P4HA2O15460 535 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 CCNE2O96020 404 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 NR3C2P08235 984 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 GCKP35557 465 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 BAG6P46379 1132 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 PMS2P54278 862 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 MAP3K10Q02779 954 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 CCDC38Q502W7 563 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 GET4Q7L5D6 327 aaPredicted RBP13.89□□□□□ -0.19
COL12A1-205ENST00000425443 USP37Q86T82 979 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 SLC47A2Q86VL8 602 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 XPO6Q96QU8 1125 aaKnown RBP13.89□□□□□ -0.19
COL12A1-205ENST00000425443 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 HACL1Q9UJ83 578 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 TBX20Q9UMR3 447 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 HNRNPDLO14979 420 aaKnown RBP13.89□□□□□ -0.19
COL12A1-205ENST00000425443 SCTRP47872 440 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 NPTX2P47972 431 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 VPS41P49754 854 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 GPC5P78333 572 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 DCAF15Q66K64 600 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 CCT6BQ92526 530 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 ZNF317Q96PQ6 595 aaPredicted RBP13.89□□□□□ -0.19
COL12A1-205ENST00000425443 WRNIP1Q96S55 665 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 MOV10L1Q9BXT6 1211 aaKnown RBP13.89□□□□□ -0.19
COL12A1-205ENST00000425443 KIF9Q9HAQ2 790 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 RIPK3Q9Y572 518 aa13.89□□□□□ -0.19
COL12A1-205ENST00000425443 LYPLA2O95372 231 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 KRT5P13647 590 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 COMTP21964 271 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms