RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 VARS2Q5ST30 1063 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PARM1Q6UWI2 310 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZNF852Q6ZMS4 543 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 CDR2LQ86X02 465 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 FGF13Q92913 245 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 GDE1Q9NZC3 331 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PCDHGA2Q9Y5H1 932 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PRR5-ARHGAP8B1AHC4 643 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 H7C4K7 107 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ACKR2O00590 384 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MAN2B1O00754 1011 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 PRRG1O14668 218 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 B4GALT5O43286 388 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 PRKCBP05771 671 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 POU2F2P09086 479 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 NAMPTP43490 491 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ARHGAP8P85298 464 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CSTF1Q05048 431 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 SPIRE1Q08AE8 756 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 AMHR2Q16671 573 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CYP4A22Q5TCH4 519 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 HAUS3Q68CZ6 603 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 IQCEQ6IPM2 695 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 SKAP1Q86WV1 359 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 GSTCDQ8NEC7 633 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 SLC7A14Q8TBB6 771 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 OXER1Q8TDS5 423 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 HASPINQ8TF76 798 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RABGGTAQ92696 567 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CLSTN3Q9BQT9 956 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CCDC94Q9BW85 323 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 FAM126AQ9BYI3 521 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 FZD8Q9H461 694 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MYO10Q9HD67 2058 aa13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 PTPRZ1P23471 2315 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB3-203ENST00000425319 K7ERI5 159 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 TBC1D4O60343 1298 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MUTP22033 750 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 NR5A1Q13285 461 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 FGF14Q92915 247 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RMDN1Q96DB5 314 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RAB34Q9BZG1 259 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ZSCAN32Q9NX65 697 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 GMEB2Q9UKD1 530 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
HLA-DQB3-203ENST00000425319 C5orf42Q9H799 3197 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 F8W810 466 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ECI2O75521 394 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RECQL4O94761 1208 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CYP11B2P19099 503 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ANAPC15P60006 121 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ORC2Q13416 577 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 NOSTRINQ8IVI9 506 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 DIS3L2Q8IYB7 885 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ZNF461Q8TAF7 563 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 FEZF2Q8TBJ5 459 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 TCHPQ9BT92 498 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 POLR3CQ9BUI4 534 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 FOXQ1Q9C009 403 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ZFP14Q9HCL3 533 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 NUB1Q9Y5A7 615 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 BACE2Q9Y5Z0 518 aa13.5□□□□□ -0.25
HLA-DQB3-203ENST00000425319 BTBD18B2RXH4 712 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 KIF4AO95239 1232 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 FGFR3P22607 806 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MCM7P33993 719 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RPS9P46781 194 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 LMNB2Q03252 620 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CDCA2Q69YH5 1023 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CATSPER3Q86XQ3 398 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 IRF7Q92985 503 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 IER2Q9BTL4 223 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 PDZD7Q9H5P4 517 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 BRD9Q9H8M2 597 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 LTB4R2Q9NPC1 389 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 DNMT3BQ9UBC3 853 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 MAFFQ9ULX9 164 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RHOP08100 348 aa13.48□□□□□ -0.25
HLA-DQB3-203ENST00000425319 RPA1P27694 616 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms