RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 RAB27AP51159 221 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 LPIN1Q14693 890 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 SYCP1Q15431 976 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 LRRC8DQ7L1W4 858 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 WDR49Q8IV35 697 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 SPC24Q8NBT2 197 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 NEK11Q8NG66 645 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 WNT8BQ93098 351 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
MDC1-205ENST00000425072 FAM212AQ96EL1 285 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 NUCKS1Q9H1E3 243 aaKnown RBP11.19□□□□□ -0.62
MDC1-205ENST00000425072 TMEM8AQ9HCN3 771 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 ERVK-5Q9HDB9 667 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 TMEM39AQ9NV64 488 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 DERAQ9Y315 318 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 LUC7L2Q9Y383 392 aaKnown RBP11.19□□□□□ -0.62
MDC1-205ENST00000425072 XPOTO43592 962 aaKnown RBP11.18□□□□□ -0.62
MDC1-205ENST00000425072 FAM189A1O60320 539 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 PHACTR2O75167 634 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 TNNC2P02585 160 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 ADRB2P07550 413 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 GHRP10912 638 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
MDC1-205ENST00000425072 CD52P31358 61 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 OSTNP61366 133 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 FAAP100Q0VG06 881 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 TBX2Q13207 712 aaPredicted RBP11.18□□□□□ -0.62
MDC1-205ENST00000425072 HS1BP3Q53T59 392 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 CCDC186Q7Z3E2 898 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
MDC1-205ENST00000425072 CNGA4Q8IV77 575 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 FMNL3Q8IVF7 1028 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 CCDC150Q8NCX0 1101 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 FBXL13Q8NEE6 735 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 SEPT8Q92599 483 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 APBB2Q92870 758 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 ANKRD36BP1Q96IX9 119 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 CGRRF1Q99675 332 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 HIPK3Q9H422 1215 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 AGO3Q9H9G7 860 aaKnown RBP11.18□□□□□ -0.62
MDC1-205ENST00000425072 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 INTS13Q9NVM9 706 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 COQ4Q9Y3A0 265 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 PCDHB2Q9Y5E7 798 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 COL6A3P12111 3177 aa11.18□□□□□ -0.62
MDC1-205ENST00000425072 A0A0U1RQF3 1178 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 A0A1W2PQJ5 194 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 TTC26A0AVF1 554 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 LACTBL1A8MY62 500 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 AKR1B15C9JRZ8 316 aaPredicted RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
MDC1-205ENST00000425072 EOMESO95936 686 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 C4BPAP04003 597 aaKnown RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 CLTBP09497 229 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 TRIM49P0CI25 452 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 TRIM49CP0CI26 452 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 ITGA4P13612 1032 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 PON1P27169 355 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 RFC2P35250 354 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 TNFSF9P41273 254 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 GCLMP48507 274 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 MXI1P50539 228 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 DLG4P78352 724 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 MYL7Q01449 175 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 PPP3CAQ08209 521 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 ENOX2Q16206 610 aaKnown RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 SLC10A6Q3KNW5 377 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 SEZ6Q53EL9 994 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 SV2AQ7L0J3 742 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 MRPL10Q7Z7H8 261 aaKnown RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 OR8K1Q8NGG5 319 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 CPLX3Q8WVH0 158 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 POP1Q99575 1024 aaKnown RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 CRACR2AQ9BSW2 395 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 C1orf112Q9NSG2 853 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 FAM105AQ9NUU6 356 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 ZNHIT6Q9NWK9 470 aaKnown RBP11.17□□□□□ -0.62
MDC1-205ENST00000425072 RAB20Q9NX57 234 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 PARP2Q9UGN5 583 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 FBXL5Q9UKA1 691 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 CAPN11Q9UMQ6 739 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 SIK3Q9Y2K2 1263 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 C2CD2Q9Y426 696 aa11.17□□□□□ -0.62
MDC1-205ENST00000425072 CITO14578 2027 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 TMEM191BP0C7N4 346 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 CCDC172P0C7W6 258 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms