RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 CEP128Q6ZU80 1094 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 REXO1Q8N1G1 1221 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ENDOVQ8N8Q3 282 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 RFWD2Q8NHY2 731 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 NCSTNQ92542 709 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 CHST7Q9NS84 486 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ANKRD36CQ5JPF3 1778 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ABCB11O95342 1321 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 LAD1O00515 517 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 GYG2O15488 501 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 EDIL3O43854 480 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PGM3O95394 542 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 CALCAP01258 141 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 FAM200BP0CF97 657 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 KRT15P19012 456 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 COILP38432 576 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ITGA8P53708 1063 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 MECOMQ03112 1051 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PPATQ06203 517 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 NLRP9Q7RTR0 991 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 CLEC10AQ8IUN9 316 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 GATA6Q92908 595 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 STMN2Q93045 179 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ART4Q93070 314 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 SPATA16Q9BXB7 569 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 SIX2Q9NPC8 291 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 TMCO1Q9UM00 188 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ZNF510Q9Y2H8 683 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 GMEB1Q9Y692 573 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 CCDC88AQ3V6T2 1871 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 FAM187AA6NFU0 413 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 CCDC160A6NGH7 325 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 RAD21O60216 631 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 IL9RQ01113 521 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 SLC1A5Q15758 541 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 PTPRN2Q92932 1015 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.48
SEC61A1-202ENST00000424880 A0A1W2PPM1 405 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 BTNL10A8MVZ5 291 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 TNFAIP3P21580 790 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 CA4P22748 312 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 STRN3Q13033 797 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.02□□□□□ -0.493e-6■■■□□ 15.1
SEC61A1-202ENST00000424880 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 RINLQ6ZS11 566 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 ARHGAP27Q6ZUM4 889 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 SATL1Q86VE3 508 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 LCA5Q86VQ0 697 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 PROM2Q8N271 834 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 SMC6Q96SB8 1091 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 FAM192AQ9GZU8 254 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 DNAJC12Q9UKB3 198 aa12.02□□□□□ -0.49
SEC61A1-202ENST00000424880 MAGEA13PA6NCF6 341 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 SPOPO43791 374 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 FTLP02792 175 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 POLD1P28340 1107 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 CHRNA3P32297 505 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 ADCY8P40145 1251 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 COG2Q14746 738 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 C10orf76Q5T2E6 689 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 MTMR9Q96QG7 549 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 YIPF2Q9BWQ6 316 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 C6orf50Q9HD87 102 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 MAP3K7O43318 606 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 RNASEH1O60930 286 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 PSMG1O95456 288 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 TTC4O95801 387 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 PLA2G4BP0C869 781 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 HOXD13P35453 343 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 YARSP54577 528 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 CYP4A11Q02928 519 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC34A1Q06495 639 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 TMED1Q13445 227 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 EPHA7Q15375 998 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 DBN1Q16643 649 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 KRT25Q7Z3Z0 450 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 TRIM42Q8IWZ5 723 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 PPFIBP2Q8ND30 876 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 HIPK4Q8NE63 616 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms