RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 FAM171A1Q5VUB5 890 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 KCNK18Q7Z418 384 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 BRAPQ7Z569 592 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 PIK3R5Q8WYR1 880 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 SMG7Q92540 1137 aaKnown RBP18.43■□□□□ 0.54
CCDC78-203ENST00000423653 AK8Q96MA6 479 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 ACO2Q99798 780 aaKnown RBP18.43■□□□□ 0.54
CCDC78-203ENST00000423653 CDT1Q9H211 546 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 LIMD1Q9UGP4 676 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 CLUHO75153 1309 aa18.43■□□□□ 0.54
CCDC78-203ENST00000423653 TMEM189-UBE2V1I3L0A0 370 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 TGM5O43548 720 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 BRD1O95696 1058 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 ASGR2P07307 311 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 SMTNP53814 917 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 MAPK7Q13164 816 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 NAB2Q15742 525 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 PSMD5Q16401 504 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 GLRA4Q5JXX5 417 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 RTP2Q5QGT7 225 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 LARP1BQ659C4 914 aaKnown RBP18.42■□□□□ 0.54
CCDC78-203ENST00000423653 MPZL3Q6UWV2 235 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.42■□□□□ 0.54
CCDC78-203ENST00000423653 CEP57Q86XR8 500 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 PALB2Q86YC2 1186 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 GLYCTKQ8IVS8 523 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 SPIRE2Q8WWL2 714 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 PPP1R10Q96QC0 940 aaKnown RBP18.42■□□□□ 0.54
CCDC78-203ENST00000423653 WDR6Q9NNW5 1121 aaKnown RBP18.42■□□□□ 0.54
CCDC78-203ENST00000423653 SLC38A7Q9NVC3 462 aa18.42■□□□□ 0.54
CCDC78-203ENST00000423653 MYH11P35749 1972 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 H0YCG3 227 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 SLC16A4O15374 487 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 TRAPPC3O43617 180 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 PAPLNO95428 1278 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 MCF2P10911 925 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 PLS3P13797 630 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 RPL17P18621 184 aaKnown RBP18.41■□□□□ 0.54
CCDC78-203ENST00000423653 LIN9Q5TKA1 542 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 PRSS55Q6UWB4 352 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-203ENST00000423653 SYT2Q8N9I0 419 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-203ENST00000423653 TCHPQ9BT92 498 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 PIDD1Q9HB75 910 aa18.41■□□□□ 0.54
CCDC78-203ENST00000423653 MTCL1Q9Y4B5 1905 aaKnown RBP18.41■□□□□ 0.54
CCDC78-203ENST00000423653 RFPL2O75678 378 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 B3GAT3O94766 335 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 PTPN5P54829 565 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 NHLH1Q02575 133 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 RAD51AP2Q09MP3 1159 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 NOLC1Q14978 699 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC78-203ENST00000423653 TMEM119Q4V9L6 283 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 TAS1R3Q7RTX0 852 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 RASSF8Q8NHQ8 419 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 CALML4Q96GE6 196 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 PNMA5Q96PV4 448 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 TARS2Q9BW92 718 aaKnown RBP18.4■□□□□ 0.54
CCDC78-203ENST00000423653 PTPRHQ9HD43 1115 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 LARSQ9P2J5 1176 aaKnown RBP18.4■□□□□ 0.54
CCDC78-203ENST00000423653 FBXW11Q9UKB1 542 aa18.4■□□□□ 0.54
CCDC78-203ENST00000423653 TOM1L1O75674 476 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 PLA2G4BP0C869 781 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 SPATA31D3P0C874 917 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 PDCP20941 246 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 SCP2P22307 547 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 PROZP22891 400 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 GBP2P32456 591 aaPredicted RBP18.39■□□□□ 0.53
CCDC78-203ENST00000423653 UBA7P41226 1012 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 SLC12A3P55017 1021 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 LILRA6Q6PI73 481 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 DCLRE1AQ6PJP8 1040 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 SPATA31D4Q6ZUB0 917 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 CEP120Q8N960 986 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 FEZF2Q8TBJ5 459 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 ZNF707Q96C28 371 aaPredicted RBP18.39■□□□□ 0.53
CCDC78-203ENST00000423653 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.53
CCDC78-203ENST00000423653 SNX27Q96L92 541 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 ACAP3Q96P50 834 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 PLIN2Q99541 437 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 NTPCRQ9BSD7 190 aaKnown RBP18.39■□□□□ 0.53
CCDC78-203ENST00000423653 PRKD2Q9BZL6 878 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 CXCL16Q9H2A7 254 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 IGSF9Q9P2J2 1179 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 ANKFY1Q9P2R3 1169 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 ODF2LQ9ULJ1 636 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 ZDBF2Q9HCK1 2354 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 CITO14578 2027 aa18.39■□□□□ 0.53
CCDC78-203ENST00000423653 SMIM28A0A1B0GU29 152 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 ZMYND10O75800 440 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 HNRNPA1P09651 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC78-203ENST00000423653 MYBP10242 640 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 CLCNKBP51801 687 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 OSTNP61366 133 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 TDGQ13569 410 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 UPP1Q16831 310 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 TMEM161BQ8NDZ6 487 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 LNX1Q8TBB1 728 aaPredicted RBP18.38■□□□□ 0.53
CCDC78-203ENST00000423653 CLSTN3Q9BQT9 956 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 MFSD1Q9H3U5 465 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 VWA8A3KMH1 1905 aa18.38■□□□□ 0.53
CCDC78-203ENST00000423653 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms