RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-208	ENST00000421689	BRSK2	Q8IWQ3	736 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	ABI1	Q8IZP0	508 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	URGCP	Q8TCY9	931 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	HELQ	Q8TDG4	1101 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	MFSD14A	Q96MC6	490 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	RPS6KC1	Q96S38	1066 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	TSPAN18	Q96SJ8	248 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	GAD1	Q99259	594 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	ZBED2	Q9BTP6	218 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	TMEM117	Q9H0C3	514 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	ASB7	Q9H672	318 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	RNF19A	Q9NV58	838 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	RBAK	Q9NYW8	714 aa	Predicted RBP	12.82	□□□□□ -0.36
CAST-208	ENST00000421689	KLK14	Q9P0G3	267 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	KANSL3	Q9P2N6	904 aa		12.82	□□□□□ -0.36
CAST-208	ENST00000421689	PDCD11	Q14690	1871 aa	Known RBP	12.82	□□□□□ -0.36
CAST-208	ENST00000421689	TTC26	A0AVF1	554 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	LACTBL1	A8MY62	500 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	INPPL1	O15357	1258 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	SLC16A3	O15427	465 aa	Known RBP	12.81	□□□□□ -0.36
CAST-208	ENST00000421689	AKAP3	O75969	853 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	GJB5	O95377	273 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	GNA14	O95837	355 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	FGFR1	P11362	822 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	MLH1	P40692	756 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	ZNF165	P49910	485 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	MYL5	Q02045	173 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	CYP24A1	Q07973	514 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	XKR4	Q5GH76	650 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	FAM117B	Q6P1L5	589 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	CHRDL2	Q6WN34	429 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.81	□□□□□ -0.36
CAST-208	ENST00000421689	USP37	Q86T82	979 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	FAM186B	Q8IYM0	893 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	TDH	Q8IZJ6	230 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	ZNF689	Q96CS4	500 aa	Predicted RBP	12.81	□□□□□ -0.36
CAST-208	ENST00000421689	FAM212A	Q96EL1	285 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	EEF2KMT	Q96G04	330 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	SNX27	Q96L92	541 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	CASD1	Q96PB1	797 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	PRO3102	Q9H379	93 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	TSPY26P	Q9H489	355 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	THAP9	Q9H5L6	903 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	CNTN3	Q9P232	1028 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	INSL6	Q9Y581	213 aa		12.81	□□□□□ -0.36
CAST-208	ENST00000421689	SMIM28	A0A1B0GU29	152 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	TBKBP1	A7MCY6	615 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	SMTNL1	A8MU46	457 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	IKBKB	O14920	756 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	MEFV	O15553	781 aa	Predicted RBP	12.8	□□□□□ -0.36
CAST-208	ENST00000421689	KRT13	P13646	458 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	KCNE1	P15382	129 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	GATM	P50440	423 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	SCNN1G	P51170	649 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	HTRA4	P83105	476 aa	Predicted RBP	12.8	□□□□□ -0.36
CAST-208	ENST00000421689	ENPEP	Q07075	957 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	PSMD6	Q15008	389 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	CCDC40	Q4G0X9	1142 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	NOMO2	Q5JPE7	1267 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	INTS8	Q75QN2	995 aa	Known RBP	12.8	□□□□□ -0.36
CAST-208	ENST00000421689	FRMD5	Q7Z6J6	570 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	NT5DC4	Q86YG4	428 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	FAM114A1	Q8IWE2	563 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	GSTCD	Q8NEC7	633 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	ZFP42	Q96MM3	310 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	FNBP1	Q96RU3	617 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	YME1L1	Q96TA2	773 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	RAD9A	Q99638	391 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	MRPL9	Q9BYD2	267 aa	Known RBP	12.8	□□□□□ -0.36
CAST-208	ENST00000421689	RC3H2	Q9HBD1	1191 aa	Known RBP	12.8	□□□□□ -0.36
CAST-208	ENST00000421689	METTL14	Q9HCE5	456 aa	Known RBP	12.8	□□□□□ -0.36
CAST-208	ENST00000421689	MIOS	Q9NXC5	875 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	INPP5F	Q9Y2H2	1132 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	DERA	Q9Y315	318 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	NFE2L3	Q9Y4A8	694 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	PDE4DIP	Q5VU43	2346 aa		12.8	□□□□□ -0.36
CAST-208	ENST00000421689	GBF1	Q92538	1859 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	BECN2	A8MW95	431 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	TULP1	O00294	542 aa	Predicted RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	PTGES	O14684	152 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	TLL1	O43897	1013 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	POMC	P01189	267 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	TH	P07101	528 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	AFF1	P51825	1210 aa	Known RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	MCCD1	P59942	119 aa	Predicted RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	GRIK3	Q13003	919 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	BTG3	Q14201	252 aa	Predicted RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	PAN2	Q504Q3	1202 aa	Known RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	CMTR2	Q8IYT2	770 aa	Known RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	LRRC43	Q8N309	656 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	AOPEP	Q8N6M6	819 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	TMC2	Q8TDI7	906 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	PARD3B	Q8TEW8	1205 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	CCDC127	Q96BQ5	260 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	BORCS6	Q96GS4	357 aa		12.79	□□□□□ -0.36
CAST-208	ENST00000421689	ZMAT2	Q96NC0	199 aa	Known RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	FAM193B	Q96PV7	902 aa	Predicted RBP	12.79	□□□□□ -0.36
CAST-208	ENST00000421689	CXCL16	Q9H2A7	254 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms