RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 TIMP1P01033 207 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 DLATP10515 647 aaKnown RBP23.34■■□□□ 1.33
ABCF3-202ENST00000421340 FAM189BP81408 668 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 CCDC173Q0VFZ6 552 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 XKR4Q5GH76 650 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 SPECC1LQ69YQ0 1117 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 KRT39Q6A163 491 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 ALKAL1Q6UXT8 129 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 PPP1R9BQ96SB3 815 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 ADAM2Q99965 735 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 C1orf112Q9NSG2 853 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 SNTG2Q9NY99 539 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 IMPACTQ9P2X3 320 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 COQ4Q9Y3A0 265 aa23.34■■□□□ 1.33
ABCF3-202ENST00000421340 UMODL1Q5DID0 1318 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 LACTBL1A8MY62 500 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 MGEA5O60502 916 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 CXCL8P10145 99 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 TNNI1P19237 187 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 CYP2C18P33260 490 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 DUOXA2Q1HG44 320 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 GBP6Q6ZN66 633 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 C15orf39Q6ZRI6 1047 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 ZNF516Q92618 1163 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 POP1Q99575 1024 aaKnown RBP23.33■■□□□ 1.33
ABCF3-202ENST00000421340 NUP58Q9BVL2 599 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 PPP1R12CQ9BZL4 782 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 TMEM117Q9H0C3 514 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 TSPYL2Q9H2G4 693 aaPredicted RBP23.33■■□□□ 1.33
ABCF3-202ENST00000421340 UBN1Q9NPG3 1134 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 SIK3Q9Y2K2 1263 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 C2CD2Q9Y426 696 aa23.33■■□□□ 1.33
ABCF3-202ENST00000421340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.33■■□□□ 1.33
ABCF3-202ENST00000421340 MEFVO15553 781 aaPredicted RBP23.32■■□□□ 1.32
ABCF3-202ENST00000421340 C4BPAP04003 597 aaKnown RBP23.32■■□□□ 1.32
ABCF3-202ENST00000421340 GCLMP48507 274 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 MXI1P50539 228 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 WNT7BP56706 349 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 KCNMA1Q12791 1236 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 SYCP1Q15431 976 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 CBWD6Q4V339 395 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 CBWD3Q5JTY5 395 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 CBWD5Q5RIA9 395 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 SLC24A5Q71RS6 500 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 SV2AQ7L0J3 742 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 DBF4BQ8NFT6 615 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 CACTINQ8WUQ7 758 aaKnown RBP23.32■■□□□ 1.32
ABCF3-202ENST00000421340 PGBD4Q96DM1 585 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 SNX27Q96L92 541 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 NXF3Q9H4D5 531 aaKnown RBP23.32■■□□□ 1.32
ABCF3-202ENST00000421340 CNTN3Q9P232 1028 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 GIT1Q9Y2X7 761 aa23.32■■□□□ 1.32
ABCF3-202ENST00000421340 TRIM43BA6NCK2 446 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 C9IYK1 514 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 EOMESO95936 686 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 ITGA4P13612 1032 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 CCL23P55773 120 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 MYL7Q01449 175 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 EXOC3L4Q17RC7 722 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 ZACNQ401N2 412 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 FIGNQ5HY92 759 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 RTN4RL1Q86UN2 441 aaPredicted RBP23.31■■□□□ 1.32
ABCF3-202ENST00000421340 DRC7Q8IY82 874 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 EHBP1Q8NDI1 1231 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 TRIM43Q96BQ3 446 aaPredicted RBP23.31■■□□□ 1.32
ABCF3-202ENST00000421340 PLCB1Q9NQ66 1216 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 DAAM1Q9Y4D1 1078 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 HES2Q9Y543 173 aa23.31■■□□□ 1.32
ABCF3-202ENST00000421340 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.31■■□□□ 1.32
ABCF3-202ENST00000421340 RECQL4O94761 1208 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 KCNE1P15382 129 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 TBX2Q13207 712 aaPredicted RBP23.3■■□□□ 1.32
ABCF3-202ENST00000421340 TRIM14Q14142 442 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 MFSD5Q6N075 450 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 FAM212AQ96EL1 285 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 ABHD8Q96I13 439 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 SCLYQ96I15 445 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 EDEM3Q9BZQ6 932 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 RNF39Q9H2S5 420 aa23.3■■□□□ 1.32
ABCF3-202ENST00000421340 ELAC1Q9H777 363 aaKnown RBP23.3■■□□□ 1.32
ABCF3-202ENST00000421340 RNF216Q9NWF9 866 aaPredicted RBP23.3■■□□□ 1.32
ABCF3-202ENST00000421340 KIAA0100Q14667 2235 aaKnown RBP23.3■■□□□ 1.32
ABCF3-202ENST00000421340 ENPP3O14638 875 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 RAG1P15918 1043 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 PON1P27169 355 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 EPC2Q52LR7 807 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 TMC6Q7Z403 805 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 ZNF598Q86UK7 904 aaKnown RBP23.29■■□□□ 1.32
ABCF3-202ENST00000421340 ECHDC2Q86YB7 292 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 TMEM199Q8N511 208 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 FBXL13Q8NEE6 735 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 LMO3Q8TAP4 145 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 ANKRD36BP1Q96IX9 119 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 PARP2Q9UGN5 583 aa23.29■■□□□ 1.32
ABCF3-202ENST00000421340 GOLGA6L6A8MZA4 724 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 TNNC2P02585 160 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 PFKMP08237 780 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 AKAP5P24588 427 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 ZBTB6Q15916 424 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 COL13A1Q5TAT6 717 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms