RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 MLKLQ8NB16 471 aa29.54■■■□□ 2.32
FAAP20-207ENST00000420515 XXYLT1Q8NBI6 393 aa29.54■■■□□ 2.32
FAAP20-207ENST00000420515 GOLGA5Q8TBA6 731 aa29.54■■■□□ 2.32
FAAP20-207ENST00000420515 FBXL18Q96ME1 805 aa29.54■■■□□ 2.32
FAAP20-207ENST00000420515 DUSP9Q99956 384 aaKnown RBP29.54■■■□□ 2.32
FAAP20-207ENST00000420515 UBN1Q9NPG3 1134 aa29.54■■■□□ 2.32
FAAP20-207ENST00000420515 PCDHA11Q9Y5I1 949 aa29.54■■■□□ 2.32
FAAP20-207ENST00000420515 MRPL42Q9Y6G3 142 aaKnown RBP29.54■■■□□ 2.32
FAAP20-207ENST00000420515 TTC26A0AVF1 554 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 LACTBL1A8MY62 500 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 LINC00271P0C7V0 271 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 NR2F2P24468 414 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 YARSP54577 528 aaKnown RBP29.53■■■□□ 2.32
FAAP20-207ENST00000420515 PAK1Q13153 545 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 TTI2Q6NXR4 508 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 SASS6Q6UVJ0 657 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 ZNF280BQ86YH2 543 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 SLC9A9Q8IVB4 645 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 CMTR2Q8IYT2 770 aaKnown RBP29.53■■■□□ 2.32
FAAP20-207ENST00000420515 FAM212AQ96EL1 285 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 NKX2-4Q9H2Z4 354 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 RPF1Q9H9Y2 349 aaKnown RBP29.53■■■□□ 2.32
FAAP20-207ENST00000420515 CACNG4Q9UBN1 327 aa29.53■■■□□ 2.32
FAAP20-207ENST00000420515 SZT2Q5T011 3432 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 NFIL3Q16649 462 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 XKR4Q5GH76 650 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 C11orf57Q6ZUT1 292 aaPredicted RBP29.52■■■□□ 2.32
FAAP20-207ENST00000420515 TMEM174Q8WUU8 243 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 FAM84AQ96KN4 292 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 CWH43Q9H720 699 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 CNTN3Q9P232 1028 aa29.52■■■□□ 2.32
FAAP20-207ENST00000420515 EXOC3O60645 756 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 DDHD2O94830 711 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 LDHAP00338 332 aaKnown RBP29.51■■■□□ 2.32
FAAP20-207ENST00000420515 PPP1R2P41236 205 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 TYRO3Q06418 890 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 NAB2Q15742 525 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 SNRNP35Q16560 246 aaKnown RBP29.51■■■□□ 2.32
FAAP20-207ENST00000420515 EDRF1Q3B7T1 1238 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 ZSCAN23Q3MJ62 389 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 BRSK2Q8IWQ3 736 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 RPS6KC1Q96S38 1066 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 FUCA2Q9BTY2 467 aa29.51■■■□□ 2.32
FAAP20-207ENST00000420515 TOPORSQ9NS56 1045 aaPredicted RBP29.51■■■□□ 2.32
FAAP20-207ENST00000420515 RBAKQ9NYW8 714 aaPredicted RBP29.51■■■□□ 2.32
FAAP20-207ENST00000420515 LINC01553A4QN01 128 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 KIAA0391O15091 583 aaKnown RBP29.5■■■□□ 2.31
FAAP20-207ENST00000420515 DNAJB2P25686 324 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 SMAD3P84022 425 aaKnown RBP29.5■■■□□ 2.31
FAAP20-207ENST00000420515 KYAT1Q16773 422 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 CEP135Q66GS9 1140 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 DNAJB4Q9UDY4 337 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 SMIM28A0A1B0GU29 152 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 AKAP3O75969 853 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 PBX3P40426 434 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 LRRC63Q05C16 580 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 ADAM9Q13443 819 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 ZC3H3Q8IXZ2 948 aaKnown RBP29.5■■■□□ 2.31
FAAP20-207ENST00000420515 LRRC43Q8N309 656 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 URGCPQ8TCY9 931 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 PPP1R10Q96QC0 940 aaKnown RBP29.5■■■□□ 2.31
FAAP20-207ENST00000420515 TSG101Q99816 390 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 NRDE2Q9H7Z3 1164 aa29.5■■■□□ 2.31
FAAP20-207ENST00000420515 PLXNA4Q9HCM2 1894 aa29.49■■■□□ 2.31
FAAP20-207ENST00000420515 TULP1O00294 542 aaPredicted RBP29.49■■■□□ 2.31
FAAP20-207ENST00000420515 PPP2R3AQ06190 1150 aa29.49■■■□□ 2.31
FAAP20-207ENST00000420515 SOX4Q06945 474 aaPredicted RBP29.49■■■□□ 2.31
FAAP20-207ENST00000420515 STX1AQ16623 288 aa29.49■■■□□ 2.31
FAAP20-207ENST00000420515 EFCAB13Q8IY85 973 aa29.49■■■□□ 2.31
FAAP20-207ENST00000420515 FIBCD1Q8N539 461 aa29.49■■■□□ 2.31
FAAP20-207ENST00000420515 PLEKHO2Q8TD55 490 aa29.49■■■□□ 2.31
FAAP20-207ENST00000420515 C18orf25Q96B23 403 aaPredicted RBP29.49■■■□□ 2.31
FAAP20-207ENST00000420515 GZF1Q9H116 711 aaPredicted RBP29.49■■■□□ 2.31
FAAP20-207ENST00000420515 ZNF233A6NK53 670 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 NFICP08651 508 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 MYBPC2Q14324 1141 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 RAB30Q15771 203 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 JADE1Q6IE81 842 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 DNAJC25Q9H1X3 360 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 PLEKHA5Q9HAU0 1116 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 GOLGA2P5Q9HBQ8 144 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 PDE11AQ9HCR9 933 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 RWDD2AQ9UIY3 292 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 MSRAQ9UJ68 235 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 PTPRJQ12913 1337 aa29.48■■■□□ 2.31
FAAP20-207ENST00000420515 KCNE1P15382 129 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 TAP1Q03518 808 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 CYP24A1Q07973 514 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 GRIK3Q13003 919 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 RABGGTAQ92696 567 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 LRCH3Q96II8 777 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 MRPL9Q9BYD2 267 aaKnown RBP29.47■■■□□ 2.31
FAAP20-207ENST00000420515 TUBGCP4Q9UGJ1 667 aa29.47■■■□□ 2.31
FAAP20-207ENST00000420515 THP07101 528 aa29.46■■■□□ 2.31
FAAP20-207ENST00000420515 RNASELQ05823 741 aaKnown RBP29.46■■■□□ 2.31
FAAP20-207ENST00000420515 DSC1Q08554 894 aa29.46■■■□□ 2.31
FAAP20-207ENST00000420515 LMBRD2Q68DH5 695 aaPredicted RBP29.46■■■□□ 2.31
FAAP20-207ENST00000420515 PAAF1Q9BRP4 392 aa29.46■■■□□ 2.31
FAAP20-207ENST00000420515 C17orf80Q9BSJ5 609 aa29.46■■■□□ 2.31
FAAP20-207ENST00000420515 KIAA1586Q9HCI6 787 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms