RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 KREMEN1Q96MU8 473 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 FDXACB1Q9BRP7 624 aaPredicted RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 KATNAL1Q9BW62 490 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 AP5M1Q9H0R1 490 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 SETD4Q9NVD3 440 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 ANKFY1Q9P2R3 1169 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 KAT6AQ92794 2004 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 A0A087X0T9 212 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 B4GALT5O43286 388 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 KRT86O43790 486 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 FAM228BP0C875 321 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 FLT3LGP49771 235 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 BMS1Q14692 1282 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 SURF1Q15526 300 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 FSCN1Q16658 493 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 MFSD14CQ5VZR4 134 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 MTERF4Q7Z6M4 381 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 WDR49Q8IV35 697 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 PDE11AQ9HCR9 933 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 AKR1B10O60218 316 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 ZEB2O60315 1214 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 IPO7O95373 1038 aaKnown RBP14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 MCF2P10911 925 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 IRX5P78411 483 aaPredicted RBP14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 ENOSF1Q7L5Y1 443 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 TXLNBQ8N3L3 684 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 MAP7D2Q96T17 732 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 UBE2TQ9NPD8 197 aaPredicted RBP14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 FOXN3O00409 490 aaPredicted RBP14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 VTNP04004 478 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 CCDC172P0C7W6 258 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 TNFSF9P41273 254 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 PRKCZQ05513 592 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 NAB2Q15742 525 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 PAPD7Q5XG87 772 aaKnown RBP14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 MNS1Q8NEH6 495 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 CDT1Q9H211 546 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 DEF6Q9H4E7 631 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 PDZD7Q9H5P4 517 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 AKT3Q9Y243 479 aa14.46□□□□□ -0.09
TMEM50B-201ENST00000420455 MACROD2A1Z1Q3 448 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 SEPT4O43236 478 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 B4GALT4O60513 344 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 MAP2K2P36507 400 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 SP3Q02447 781 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 KYAT1Q16773 422 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 INTUQ9ULD6 942 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 A0A1B0GUA9 196 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 INO80B-WBP1J3KQ70 363 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 MEFVO15553 781 aaPredicted RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 TSPAN1O60635 241 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 DLATP10515 647 aaKnown RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 MFAP3P55082 362 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 EEF1DP3Q658K8 133 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 FNBP1Q96RU3 617 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 INO80BQ9C086 356 aaPredicted RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 NAGPAQ9UK23 515 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 DDX3XO00571 662 aaKnown RBP eCLIP14.45□□□□□ -0.13e-19■■■■■ 47.4
TMEM50B-201ENST00000420455 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 MAGEA1P43355 309 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 KIF5AQ12840 1032 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 MAP3K21Q5TCX8 1036 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 RNF10Q8N5U6 811 aaKnown RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 LNX1Q8TBB1 728 aaPredicted RBP14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 CNTN6Q9UQ52 1028 aa14.45□□□□□ -0.1
TMEM50B-201ENST00000420455 GPR25O00155 361 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 ADAMTS4O75173 837 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 TBC1D8O95759 1140 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 CST5P28325 142 aaPredicted RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 BEX3Q00994 111 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 ARID5AQ03989 594 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 CACNB2Q08289 660 aaPredicted RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 TUBB2AQ13885 445 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 ENOX2Q16206 610 aaKnown RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 CCSAPQ6IQ19 270 aaPredicted RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 RUFY4Q6ZNE9 571 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 NT5C1BQ96P26 610 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 TUBB2BQ9BVA1 445 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 ADAMTS1Q9UHI8 967 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 PUF60Q9UHX1 559 aaKnown RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 MYADML2A6NDP7 307 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 IL18RAPO95256 599 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 ARF4P18085 180 aaPredicted RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 SESTD1Q86VW0 696 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 NME8Q8N427 588 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 KLHDC9Q8NEP7 349 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 UBXN4Q92575 508 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 SECISBP2LQ93073 1101 aaKnown RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 RNF186Q9NXI6 227 aa14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 NOCTQ9UK39 431 aaKnown RBP14.44□□□□□ -0.1
TMEM50B-201ENST00000420455 SRGAP2O75044 1071 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 GNRH1P01148 92 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 HLA-DRAP01903 254 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 ZNF568Q3ZCX4 644 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 ZBTB33Q86T24 672 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 UBR7Q8N806 425 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 OR5B17Q8NGF7 314 aa14.43□□□□□ -0.1
TMEM50B-201ENST00000420455 DHX38Q92620 1227 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms