RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ZNF185O15231 689 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 CYTH3O43739 400 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 RPS6KA5O75582 802 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 MDH1P40925 334 aaKnown RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 PGM5Q15124 567 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 RASGRP2Q7LDG7 609 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 LRRC53A6NM62 1247 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 SART1O43290 800 aaKnown RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 HSPA6P17066 643 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 LMNB2Q03252 620 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 DRP2Q13474 957 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 NIPA1Q7RTP0 329 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 MTIF3Q9H2K0 278 aaKnown RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 ANAPC5Q9UJX4 755 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 ARL4AP40617 200 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 ERVK-24P63145 666 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 GRB10Q13322 594 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 TMED1Q13445 227 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 FAM47EQ6ZV65 393 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 ENGASEQ8NFI3 743 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 ENO4A6NNW6 628 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 MYBP10242 640 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 KAZNQ674X7 775 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 IL17RAQ96F46 866 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 CHP1Q99653 195 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 LIMA1Q9UHB6 759 aaKnown RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 SMIM22K7EJ46 135 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 MED24O75448 989 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 CYP2C8P10632 490 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 MAN1A1P33908 653 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 PPP2R5DQ14738 602 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 LRRC31Q6UY01 552 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 SOCS4Q8WXH5 440 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 FUCA2Q9BTY2 467 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 TAF1DQ9H5J8 278 aaPredicted RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 DNAJC17Q9NVM6 304 aaKnown RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 H7C0C1 242 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 CREB3O43889 395 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 ATP5OP48047 213 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 ACOT2P49753 483 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 GFPT1Q06210 699 aaPredicted RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 SNRNP35Q16560 246 aaKnown RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 PCSK9Q8NBP7 692 aaKnown RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 MKNK1Q9BUB5 465 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 OSBPL1AQ9BXW6 950 aa13.61□□□□□ -0.23
SCAF8-203ENST00000417268 DDX47Q9H0S4 455 aaKnown RBP13.61□□□□□ -0.23
SCAF8-203ENST00000417268 CA4P22748 312 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 FMR1Q06787 632 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■■□□□ 14.1
SCAF8-203ENST00000417268 ATF7IP2Q5U623 682 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ARRDC4Q8NCT1 418 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 KLRG1Q96E93 195 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 MLXIPLQ9NP71 852 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 THEGQ9P2T0 379 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 A0A1B0GTH6 734 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ESRRAP11474 423 aaPredicted RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 GABPAQ06546 454 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 SLC30A10Q6XR72 485 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 REXO1L1PQ8IX06 675 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 BBS5Q8N3I7 341 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 MTMR14Q8NCE2 650 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 GCNAQ96QF7 691 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 MYPNQ86TC9 1320 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 C17orf102A2RUQ5 167 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 FGRP09769 529 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 TRIP13Q15645 432 aaPredicted RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ETNK1Q9HBU6 452 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 VTA1Q9NP79 307 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ANGPTL2Q9UKU9 493 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 KPNA6O60684 536 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 LSP1P33241 339 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 NLRP11P59045 1033 aaKnown RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 RBP5P82980 135 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 BSPRYQ5W0U4 402 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
SCAF8-203ENST00000417268 RFX6Q8HWS3 928 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 RIOX2Q8IUF8 465 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms