RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 GRIN1Q05586 938 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 SIGLEC14Q08ET2 396 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 SF3A1Q15459 793 aaKnown RBP19.62■□□□□ 0.73
CPNE1-210ENST00000416778 RTP2Q5QGT7 225 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 FAM171A1Q5VUB5 890 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 PLCD3Q8N3E9 789 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 CEP120Q8N960 986 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 LNX1Q8TBB1 728 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-210ENST00000416778 LRRC15Q8TF66 581 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 HASPINQ8TF76 798 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 PBXIP1Q96AQ6 731 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 FAM122AQ96E09 287 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 ASIC4Q96FT7 647 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 ZBTB45Q96K62 511 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-210ENST00000416778 CLSTN3Q9BQT9 956 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 TTPALQ9BTX7 342 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 RHOBTB2Q9BYZ6 727 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 DPP7Q9UHL4 492 aa19.62■□□□□ 0.73
CPNE1-210ENST00000416778 SF3B1O75533 1304 aaKnown RBP eCLIP19.61■□□□□ 0.733e-7■■■■■ 90.2
CPNE1-210ENST00000416778 BMP15O95972 392 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 MYBP10242 640 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 MCF2P10911 925 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 UBA7P41226 1012 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 SMTNP53814 917 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 PRSS55Q6UWB4 352 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-210ENST00000416778 CYP26C1Q6V0L0 522 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 ZBTB33Q86T24 672 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 KREMEN2Q8NCW0 462 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 TCHPQ9BT92 498 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 PLEKHA4Q9H4M7 779 aa19.61■□□□□ 0.73
CPNE1-210ENST00000416778 SPDYE4A6NLX3 237 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 RFPL2O75678 378 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
CPNE1-210ENST00000416778 LONP1P36776 959 aaKnown RBP19.6■□□□□ 0.73
CPNE1-210ENST00000416778 CLCNKBP51801 687 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 OSTNP61366 133 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 UPP1Q16831 310 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 GLRA4Q5JXX5 417 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 CEP57Q86XR8 500 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 PIK3R5Q8WYR1 880 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 ZNF707Q96C28 371 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-210ENST00000416778 ZMAT2Q96NC0 199 aaKnown RBP19.6■□□□□ 0.73
CPNE1-210ENST00000416778 ACAP3Q96P50 834 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 CCDC94Q9BW85 323 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-210ENST00000416778 BLOC1S4Q9NUP1 217 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 TDRD15B5MCY1 1934 aaKnown RBP19.6■□□□□ 0.73
CPNE1-210ENST00000416778 MYO10Q9HD67 2058 aa19.6■□□□□ 0.73
CPNE1-210ENST00000416778 TMEM189-UBE2V1I3L0A0 370 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 MEFVO15553 781 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-210ENST00000416778 PDCP20941 246 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 YARSP54577 528 aaKnown RBP19.59■□□□□ 0.73
CPNE1-210ENST00000416778 CACNB1Q02641 598 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-210ENST00000416778 CREMQ03060 361 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 SOX4Q06945 474 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-210ENST00000416778 ELAVL2Q12926 359 aaKnown RBP19.59■□□□□ 0.73
CPNE1-210ENST00000416778 PTPAQ15257 358 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 ZNF568Q3ZCX4 644 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 MPZL3Q6UWV2 235 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 GLYCTKQ8IVS8 523 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 KCNN1Q92952 543 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 CALML4Q96GE6 196 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 WDR6Q9NNW5 1121 aaKnown RBP19.59■□□□□ 0.73
CPNE1-210ENST00000416778 SORCS3Q9UPU3 1222 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 CLIC4Q9Y696 253 aa19.59■□□□□ 0.73
CPNE1-210ENST00000416778 TOM1L1O75674 476 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 B3GAT3O94766 335 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 ASGR2P07307 311 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 KCNE1P15382 129 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 SYT1P21579 422 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 FGFR3P22607 806 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 STRN3Q13033 797 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 ELMSAN1Q6PJG2 1045 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 ZPBP2Q6X784 338 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 OTOP3Q7RTS5 596 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 UBALD2Q8IYN6 164 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 TDRD5Q8NAT2 981 aaKnown RBP19.58■□□□□ 0.72
CPNE1-210ENST00000416778 ACSF2Q96CM8 615 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-210ENST00000416778 INTS4Q96HW7 963 aaKnown RBP19.58■□□□□ 0.72
CPNE1-210ENST00000416778 UROC1Q96N76 676 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 KCNH6Q9H252 994 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 TOPORSQ9NS56 1045 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-210ENST00000416778 LARSQ9P2J5 1176 aaKnown RBP19.58■□□□□ 0.72
CPNE1-210ENST00000416778 WDFY4Q6ZS81 3184 aa19.58■□□□□ 0.72
CPNE1-210ENST00000416778 MUC6Q6W4X9 2439 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 VPS37CA5D8V6 355 aaPredicted RBP19.57■□□□□ 0.72
CPNE1-210ENST00000416778 ADAM12O43184 909 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 N4BP1O75113 896 aaKnown RBP19.57■□□□□ 0.72
CPNE1-210ENST00000416778 DDIT3P35638 169 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 NCKAP1LP55160 1127 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 DHX8Q14562 1220 aaKnown RBP19.57■□□□□ 0.72
CPNE1-210ENST00000416778 MCM6Q14566 821 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 KARSQ15046 597 aaKnown RBP19.57■□□□□ 0.72
CPNE1-210ENST00000416778 SLC10A6Q3KNW5 377 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 CCDC149Q6ZUS6 474 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 HAUS6Q7Z4H7 955 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 FBXL6Q8N531 539 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 C3orf58Q8NDZ4 430 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 RAD54LQ92698 747 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 DDX27Q96GQ7 796 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms