RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
UBXN4-203ENST00000416538 CACNA1HO95180 2353 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 K7ERI5 159 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 ADAM12O43184 909 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 THP07101 528 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 SIGLEC14Q08ET2 396 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 USP41Q3LFD5 358 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 ZNF568Q3ZCX4 644 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 ARSHQ5FYA8 562 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 LARP1BQ659C4 914 aaKnown RBP16.6■□□□□ 0.25
UBXN4-203ENST00000416538 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
UBXN4-203ENST00000416538 BMP8AQ7Z5Y6 402 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM130Q8N3G9 435 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 SYT2Q8N9I0 419 aaPredicted RBP16.6■□□□□ 0.25
UBXN4-203ENST00000416538 TDRD5Q8NAT2 981 aaKnown RBP16.6■□□□□ 0.25
UBXN4-203ENST00000416538 KREMEN2Q8NCW0 462 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 CMASQ8NFW8 434 aaPredicted RBP16.6■□□□□ 0.25
UBXN4-203ENST00000416538 FAM122AQ96E09 287 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 ZBTB45Q96K62 511 aaPredicted RBP16.6■□□□□ 0.25
UBXN4-203ENST00000416538 DRC1Q96MC2 740 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 KMT5AQ9NQR1 393 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 BLOC1S4Q9NUP1 217 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 NR2E1Q9Y466 385 aa16.6■□□□□ 0.25
UBXN4-203ENST00000416538 SF3B1O75533 1304 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■■■■ 97.6
UBXN4-203ENST00000416538 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 TGM5O43548 720 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 NR1I2O75469 434 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 PAPLNO95428 1278 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 GRM5P41594 1212 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
UBXN4-203ENST00000416538 OSTNP61366 133 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 LILRA6Q6PI73 481 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 TMEM161BQ8NDZ6 487 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 SNX27Q96L92 541 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 ZMAT2Q96NC0 199 aaKnown RBP16.59■□□□□ 0.25
UBXN4-203ENST00000416538 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
UBXN4-203ENST00000416538 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
UBXN4-203ENST00000416538 I3L4J1 428 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 TADA2AO75478 443 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 MAPTP10636 758 aaKnown RBP16.58■□□□□ 0.24
UBXN4-203ENST00000416538 XKR4Q5GH76 650 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 IER5LQ5T953 404 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 FAM171A1Q5VUB5 890 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 ALKAL1Q6UXT8 129 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 C15orf39Q6ZRI6 1047 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 ZBTB33Q86T24 672 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 ZDHHC14Q8IZN3 488 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 LNX1Q8TBB1 728 aaPredicted RBP16.58■□□□□ 0.24
UBXN4-203ENST00000416538 PIK3R5Q8WYR1 880 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 CLSTN3Q9BQT9 956 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 MRPL4Q9BYD3 311 aaKnown RBP16.58■□□□□ 0.24
UBXN4-203ENST00000416538 FNIP2Q9P278 1114 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 FBXW11Q9UKB1 542 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 USTQ9Y2C2 406 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
UBXN4-203ENST00000416538 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 CCDC195A0A1B0GUA6 201 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
UBXN4-203ENST00000416538 TMEM189-UBE2V1I3L0A0 370 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 HARSP12081 509 aaKnown RBP16.57■□□□□ 0.24
UBXN4-203ENST00000416538 PLS3P13797 630 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 CLCNKBP51801 687 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 PTPAQ15257 358 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 SF3A1Q15459 793 aaKnown RBP16.57■□□□□ 0.24
UBXN4-203ENST00000416538 SEZ6Q53EL9 994 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 MPZL3Q6UWV2 235 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
UBXN4-203ENST00000416538 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 GPR65Q8IYL9 337 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 PRSS33Q8NF86 280 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 SPIRE2Q8WWL2 714 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 REEP2Q9BRK0 252 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 TTPALQ9BTX7 342 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 C17orf75Q9HAS0 396 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.57■□□□□ 0.24
UBXN4-203ENST00000416538 LIMD1Q9UGP4 676 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 SORCS3Q9UPU3 1222 aa16.57■□□□□ 0.24
UBXN4-203ENST00000416538 COL4A3Q01955 1670 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 CLUHO75153 1309 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 PLCG1P19174 1290 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 FGFR3P22607 806 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 BRCC3P46736 316 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 RESTQ13127 1097 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
UBXN4-203ENST00000416538 PSMD5Q16401 504 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 UPP1Q16831 310 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 BRAPQ7Z569 592 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 CEP57Q86XR8 500 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 FBXL6Q8N531 539 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 DDX27Q96GQ7 796 aaKnown RBP16.56■□□□□ 0.24
UBXN4-203ENST00000416538 NTPCRQ9BSD7 190 aaKnown RBP16.56■□□□□ 0.24
UBXN4-203ENST00000416538 TIPINQ9BVW5 301 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms