RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 GNL1P36915 607 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ANKRD20A4Q4UJ75 823 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ANKRD20A8PQ5CZ79 823 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ANKRD20A2Q5SQ80 823 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ANKRD20A1Q5TYW2 823 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 SH3KBP1Q96B97 665 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 MUC3BQ9H195 1237 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 E2F8A0AVK6 867 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 MAPK13O15264 365 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 DIAPH2O60879 1101 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 RTN2O75298 545 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 FGFR4P22455 802 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 GGCXP38435 758 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 NLRP11P59045 1033 aaKnown RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 FBXO38Q6PIJ6 1188 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 RHOT1Q8IXI2 618 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 PGBD3Q8N328 593 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 CASZ1Q86V15 1759 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 PGK2P07205 417 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 FMR1Q06787 632 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 SMTNL2Q2TAL5 461 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 XKR3Q5GH77 459 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ULK4Q96C45 1275 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 TAF6LQ9Y6J9 622 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 GOLGA8RI6L899 631 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 KRT37O76014 449 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ITGA4P13612 1032 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 THEMIS2Q5TEJ8 643 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 BARGINQ6ZT62 677 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 PFASO15067 1338 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 NR3C2P08235 984 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 NCAPHQ15003 741 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 SBK1Q52WX2 424 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ATF7IP2Q5U623 682 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 TRIM9Q9C026 710 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 TRIM10Q9UDY6 481 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 KRT17Q04695 432 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 PRMT6Q96LA8 375 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 CCDC138Q96M89 665 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 MXRA8Q9BRK3 442 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 COG4Q9H9E3 785 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 DDX56Q9NY93 547 aaKnown RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 LRRC14Q15048 493 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 SEPT1Q8WYJ6 367 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 C18orf8Q96DM3 657 aa11.24□□□□□ -0.61
COL12A1-203ENST00000416123 ALG13Q9NP73 1137 aaKnown RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 CHORDC1Q9UHD1 332 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-203ENST00000416123 LBRQ14739 615 aaKnown RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 MOV10L1Q9BXT6 1211 aaKnown RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 MYBL1P10243 752 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CETPP11597 493 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 DPF2Q92785 391 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 MAGEB5Q9BZ81 275 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CCDC188H7C350 402 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 TCF7P36402 384 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 MTM1Q13496 603 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 SLC15A2Q16348 729 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CYP4A22Q5TCH4 519 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 IL31Q6EBC2 164 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CLMNQ96JQ2 1002 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 ZNF512Q96ME7 567 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 AGPAT5Q9NUQ2 364 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 APEX2Q9UBZ4 518 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 DGAT1O75907 488 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 ASMTLO95671 621 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 PDIA5Q14554 519 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 FASTKD1Q53R41 847 aaKnown RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 SARM1Q6SZW1 724 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 TRIM72Q6ZMU5 477 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 RFX8Q6ZV50 586 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 TMEM60Q9H2L4 133 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CNTNAP5Q8WYK1 1306 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 ORC1Q13415 861 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 SNF8Q96H20 258 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 MGEA5O60502 916 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 APRTP07741 180 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 NUDT12Q9BQG2 462 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 KCNH7Q9NS40 1196 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 TXLNGQ9NUQ3 528 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms