RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 KIF13AQ9H1H9 1805 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 TULP2O00295 520 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ITGA8P53708 1063 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 FAM160B1Q5W0V3 765 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 TMEM154Q6P9G4 183 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
SCN1B-202ENST00000415950 RHPN2Q8IUC4 686 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ATXN7L3BQ96GX2 97 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 STK33Q9BYT3 514 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 CCDC90BQ9GZT6 254 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 AS3MTQ9HBK9 375 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 IRAK4Q9NWZ3 460 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ORC6Q9Y5N6 252 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 PFDN6O15212 129 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 KRT38O76015 456 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ENO1P06733 434 aaKnown RBP13.65□□□□□ -0.22
SCN1B-202ENST00000415950 UBTFL6P0CB48 400 aaPredicted RBP13.65□□□□□ -0.22
SCN1B-202ENST00000415950 AARSP49588 968 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCN1B-202ENST00000415950 AMPD2Q01433 879 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 IL17AQ16552 155 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 IRF2BP1Q8IU81 584 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ADA2Q9NZK5 511 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
SCN1B-202ENST00000415950 MED24O75448 989 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 MAP3K6O95382 1288 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 AGBL2Q5U5Z8 902 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 SH3RF1Q7Z6J0 888 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 SNF8Q96H20 258 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 MTRQ99707 1265 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 GTSE1Q9NYZ3 720 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 PTPRUQ92729 1446 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 DRP2Q13474 957 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 FUKQ8N0W3 1084 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-202ENST00000415950 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 GOLGA8QA0A0J9YX86 632 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 GOLGA8OA6NCC3 632 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 GOLGA8NF8WBI6 632 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 PHF2O75151 1096 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 CDH16O75309 829 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 PIAS1O75925 651 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ARPP19P56211 112 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 TFDP1Q14186 410 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 MEI1Q5TIA1 1274 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 PRPF31Q8WWY3 499 aaKnown RBP13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ALKBH8Q96BT7 664 aaKnown RBP13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-202ENST00000415950 KIFC3Q9BVG8 833 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 CREB3O43889 395 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 PMLP29590 882 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 MAPK7Q13164 816 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 KCTD2Q14681 263 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 SCFD1Q8WVM8 642 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ING2Q9H160 280 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 ACP6Q9NPH0 428 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
SCN1B-202ENST00000415950 NDE1Q9NXR1 346 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
SCN1B-202ENST00000415950 CYTH3O43739 400 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 SUPT3HO75486 399 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 ACOT2P49753 483 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 ISLR2Q6UXK2 745 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 NUDCD3Q8IVD9 361 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 TMEM35BQ8NCS4 154 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 OR6B3Q8NGW1 331 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 RNF217Q8TC41 542 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 LOC100653049A0A140TA62 436 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 KRT34O76011 436 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 PGM1P36871 562 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 KCNA1Q09470 495 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 DCAF15Q66K64 600 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 RWDD4Q6NW29 188 aaKnown RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 KRT27Q7Z3Y8 459 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 SIX6OS1Q8N1H7 587 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 SLC20A1Q8WUM9 679 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 KLC2Q9H0B6 622 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 KLHL8Q9P2G9 620 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 FLT1P17948 1338 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 MED7O43513 233 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 UPP2O95045 317 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 S100BP04271 92 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 PRLRP16471 622 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 GPSM2P81274 684 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 DAB2P98082 770 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 ZKSCAN4Q969J2 545 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 FAM20AQ96MK3 541 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms