RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 WASF1Q92558 559 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 VWA8A3KMH1 1905 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 KINO60870 393 aaKnown RBP17.03■□□□□ 0.32
DDX56-202ENST00000415758 XYLBO75191 536 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 MAGEA9P43362 315 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 PFKPQ01813 784 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 NR5A1Q13285 461 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 RAB33AQ14088 237 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 MLF2Q15773 248 aaPredicted RBP17.03■□□□□ 0.32
DDX56-202ENST00000415758 CALCRLQ16602 461 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 CEP57Q86XR8 500 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 ITFG1Q8TB96 612 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 PIGOQ8TEQ8 1089 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 HASPINQ8TF76 798 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 CCDC43Q96MW1 224 aaKnown RBP17.03■□□□□ 0.32
DDX56-202ENST00000415758 MTMR9Q96QG7 549 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 KCNH3Q9ULD8 1083 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 GPR179Q6PRD1 2367 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 PATJQ8NI35 1801 aa17.03■□□□□ 0.32
DDX56-202ENST00000415758 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 LRRIQ4A6NIV6 560 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 ADAM12O43184 909 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 FDPSP14324 419 aaKnown RBP17.02■□□□□ 0.32
DDX56-202ENST00000415758 KRT2P35908 639 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 AXDND1Q5T1B0 1012 aaPredicted RBP17.02■□□□□ 0.32
DDX56-202ENST00000415758 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
DDX56-202ENST00000415758 MCPH1Q8NEM0 835 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 HINFPQ9BQA5 517 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 PDZD7Q9H5P4 517 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 GPRC5CQ9NQ84 441 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
DDX56-202ENST00000415758 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.32
DDX56-202ENST00000415758 MTF2Q9Y483 593 aaPredicted RBP17.02■□□□□ 0.32
DDX56-202ENST00000415758 A0A087WWV3 80 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 FAM170BA6NMN3 283 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 TMEM189-UBE2V1I3L0A0 370 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 N4BP3O15049 544 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 SPTLC1O15269 473 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 CCL16O15467 120 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 LAMTOR5O43504 91 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 USO1O60763 962 aaKnown RBP17.01■□□□□ 0.31
DDX56-202ENST00000415758 FGFR3P22607 806 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 TXKP42681 527 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 RBM25P49756 843 aaKnown RBP17.01■□□□□ 0.31
DDX56-202ENST00000415758 ZBTB8OSQ8IWT0 167 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 SLC7A14Q8TBB6 771 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 NELL1Q92832 810 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 NELL2Q99435 816 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 CXCL16Q9H2A7 254 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 SPATA6Q9NWH7 488 aaPredicted RBP17.01■□□□□ 0.31
DDX56-202ENST00000415758 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
DDX56-202ENST00000415758 PCDHGA2Q9Y5H1 932 aa17.01■□□□□ 0.31
DDX56-202ENST00000415758 ACKR2O00590 384 aa17■□□□□ 0.31
DDX56-202ENST00000415758 NEMFO60524 1076 aa17■□□□□ 0.31
DDX56-202ENST00000415758 RECQL4O94761 1208 aa17■□□□□ 0.31
DDX56-202ENST00000415758 OR1D2P34982 312 aa17■□□□□ 0.31
DDX56-202ENST00000415758 MAPK6Q16659 721 aa17■□□□□ 0.31
DDX56-202ENST00000415758 PABPC1LQ4VXU2 614 aaKnown RBP17■□□□□ 0.31
DDX56-202ENST00000415758 VARS2Q5ST30 1063 aaKnown RBP17■□□□□ 0.31
DDX56-202ENST00000415758 ZBTB41Q5SVQ8 909 aa17■□□□□ 0.31
DDX56-202ENST00000415758 CATSPER3Q86XQ3 398 aa17■□□□□ 0.31
DDX56-202ENST00000415758 NPAS3Q8IXF0 933 aa17■□□□□ 0.31
DDX56-202ENST00000415758 GPR161Q8N6U8 529 aaKnown RBP17■□□□□ 0.31
DDX56-202ENST00000415758 ZBTB44Q8NCP5 570 aa17■□□□□ 0.31
DDX56-202ENST00000415758 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
DDX56-202ENST00000415758 LTB4R2Q9NPC1 389 aa17■□□□□ 0.31
DDX56-202ENST00000415758 AVENQ9NQS1 362 aaPredicted RBP17■□□□□ 0.31
DDX56-202ENST00000415758 MTRRQ9UBK8 725 aa17■□□□□ 0.31
DDX56-202ENST00000415758 POLIQ9UNA4 740 aa17■□□□□ 0.31
DDX56-202ENST00000415758 COL4A3Q01955 1670 aa17■□□□□ 0.31
DDX56-202ENST00000415758 NCOR2Q9Y618 2525 aa17■□□□□ 0.31
DDX56-202ENST00000415758 DTNBO60941 627 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 LILRB5O75023 590 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 ECI2O75521 394 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 ATP2B1P20020 1258 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 RPS9P46781 194 aaKnown RBP16.99■□□□□ 0.31
DDX56-202ENST00000415758 PRPF4BQ13523 1007 aaKnown RBP16.99■□□□□ 0.31
DDX56-202ENST00000415758 UBXN2BQ14CS0 331 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 MAEAQ7L5Y9 396 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 KXD1Q9BQD3 176 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 ADPGKQ9BRR6 497 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 GDE1Q9NZC3 331 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 BACE2Q9Y5Z0 518 aa16.99■□□□□ 0.31
DDX56-202ENST00000415758 BTBD18B2RXH4 712 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 WNT7AO00755 349 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 NAMPTP43490 491 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 FZD5Q13467 585 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms