RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 NBPF20Q3BBV1 942 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 ARHGAP29Q52LW3 1261 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 TDRD10Q5VZ19 366 aaKnown RBP11.85□□□□□ -0.51
CLGN-202ENST00000414773 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 OR5B17Q8NGF7 314 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 ZNF296Q8WUU4 475 aaPredicted RBP11.85□□□□□ -0.51
CLGN-202ENST00000414773 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 CGRRF1Q99675 332 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 TRIM10Q9UDY6 481 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 C4BPAP04003 597 aaKnown RBP11.85□□□□□ -0.51
CLGN-202ENST00000414773 SOX5P35711 763 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 ARHGAP25P42331 645 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 PTK2Q05397 1052 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 SPA17Q15506 151 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 ZACNQ401N2 412 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 PPM1KQ8N3J5 372 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLGN-202ENST00000414773 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
CLGN-202ENST00000414773 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
CLGN-202ENST00000414773 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 FOXN3O00409 490 aaPredicted RBP11.84□□□□□ -0.51
CLGN-202ENST00000414773 EVI5O60447 810 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 FKTNO75072 461 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 GNAT1P11488 350 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
CLGN-202ENST00000414773 KCNA10Q16322 511 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 FAM47CQ5HY64 1035 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
CLGN-202ENST00000414773 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 BRCA2P51587 3418 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
CLGN-202ENST00000414773 HLA-DRAP01903 254 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 ASGR1P07306 291 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 RFX1P22670 979 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 HOXC8P31273 242 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 GNG11P61952 73 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 TATDN2Q93075 761 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 ADAMTS1Q9UHI8 967 aa11.84□□□□□ -0.51
CLGN-202ENST00000414773 VNN1O95497 513 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 CXCL8P10145 99 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 FERP16591 822 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 PIK3CAP42336 1068 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 KREMEN1Q96MU8 473 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 NT5C1BQ96P26 610 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
CLGN-202ENST00000414773 LACRTQ9GZZ8 138 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 PCDHA13Q9Y5I0 950 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 A0A087X0T9 212 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 FANCGO15287 622 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 LCA5LO95447 670 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 FAM228BP0C875 321 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 STAG3L1P0CL83 205 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 MCF2P10911 925 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 DARSP14868 501 aaKnown RBP11.83□□□□□ -0.52
CLGN-202ENST00000414773 USP8P40818 1118 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 PRKCIP41743 596 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 NKX3-2P78367 333 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 GDF6Q6KF10 455 aaPredicted RBP11.83□□□□□ -0.52
CLGN-202ENST00000414773 KLHDC9Q8NEP7 349 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 HELQQ8TDG4 1101 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 TMEM40Q8WWA1 233 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 JAKMIP2Q96AA8 810 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 WDR24Q96S15 920 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 RPF1Q9H9Y2 349 aaKnown RBP11.83□□□□□ -0.52
CLGN-202ENST00000414773 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
CLGN-202ENST00000414773 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 GUCA1BQ9UMX6 200 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 SCN10AQ9Y5Y9 1956 aa11.83□□□□□ -0.52
CLGN-202ENST00000414773 A0A1B0GUA9 196 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 PHACTR2O75167 634 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 CLSTN1O94985 981 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 VAV2P52735 878 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 WDR49Q8IV35 697 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 KIF18AQ8NI77 898 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 DAAM1Q9Y4D1 1078 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 BZW2Q9Y6E2 419 aaKnown RBP11.82□□□□□ -0.52
CLGN-202ENST00000414773 GNRH1P01148 92 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 INHAP05111 366 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 EIF4BP23588 611 aaKnown RBP11.82□□□□□ -0.52
CLGN-202ENST00000414773 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
CLGN-202ENST00000414773 MAGEA1P43355 309 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 MFAP3P55082 362 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 TFAMQ00059 246 aaKnown RBP11.82□□□□□ -0.52
CLGN-202ENST00000414773 SNX17Q15036 470 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 SLC18A3Q16572 532 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 CCSAPQ6IQ19 270 aaPredicted RBP11.82□□□□□ -0.52
CLGN-202ENST00000414773 EFCAB13Q8IY85 973 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 ADPGKQ9BRR6 497 aa11.82□□□□□ -0.52
CLGN-202ENST00000414773 DUSP10Q9Y6W6 482 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms