RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 SYCP3Q8IZU3 236 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 PAGE5Q96GU1 130 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 PPP1R10Q96QC0 940 aaKnown RBP27.61■■■□□ 2.01
CPNE1-207ENST00000414664 CDCA3Q99618 268 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-207ENST00000414664 HAPLN2Q9GZV7 340 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 CXCL16Q9H2A7 254 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 BLZF1Q9H2G9 400 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 IGFLR1Q9H665 355 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 PLEKHA5Q9HAU0 1116 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 MYO7AQ13402 2215 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 EYSQ5T1H1 3165 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-207ENST00000414664 ANKRD63C9JTQ0 380 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 KCNE1P15382 129 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 MRPS5P82675 430 aaKnown RBP27.6■■■□□ 2.01
CPNE1-207ENST00000414664 SEZ6Q53EL9 994 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 GLRA4Q5JXX5 417 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 SLC39A4Q6P5W5 647 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 ADGRD2Q7Z7M1 963 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 MRPL43Q8N983 215 aaKnown RBP27.6■■■□□ 2.01
CPNE1-207ENST00000414664 CCDC34Q96HJ3 373 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 ZBP1Q9H171 429 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 UBE2ZQ9H832 354 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-207ENST00000414664 MARCH5Q9NX47 278 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 CHMP5Q9NZZ3 219 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 CNTN3Q9P232 1028 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 PCDHGC5Q9Y5F6 944 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 STYXL1Q9Y6J8 313 aa27.6■■■□□ 2.01
CPNE1-207ENST00000414664 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CASTOR2A6NHX0 329 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 TADA2AO75478 443 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CXCL14O95715 111 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CTSAP10619 480 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CA8P35219 290 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 NRIP1P48552 1158 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CASP5P51878 434 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CUL4BQ13620 913 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 HSP90AA2PQ14568 343 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-207ENST00000414664 COL19A1Q14993 1142 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 NAB2Q15742 525 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 SLC10A6Q3KNW5 377 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 FAM26FQ5R3K3 315 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 EP400NLQ6ZTU2 488 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 RBM23Q86U06 439 aaKnown RBP27.59■■■□□ 2.01
CPNE1-207ENST00000414664 TMEM87AQ8NBN3 555 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 UROC1Q96N76 676 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 CLDND1Q9NY35 253 aa27.59■■■□□ 2.01
CPNE1-207ENST00000414664 SOD2P04179 222 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 CASP1P29466 404 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 GRAMD1CQ8IYS0 662 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 POMGNT1Q8WZA1 660 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 RPF1Q9H9Y2 349 aaKnown RBP27.58■■■□□ 2.01
CPNE1-207ENST00000414664 ADAM28Q9UKQ2 775 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 SSX2IPQ9Y2D8 614 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-207ENST00000414664 IRAK3Q9Y616 596 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 CITO14578 2027 aa27.58■■■□□ 2.01
CPNE1-207ENST00000414664 EIF3DO15371 548 aaKnown RBP eCLIP27.57■■■□□ 2
CPNE1-207ENST00000414664 PRPF6O94906 941 aaKnown RBP27.57■■■□□ 2
CPNE1-207ENST00000414664 KCNA1Q09470 495 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 DUSP6Q16828 381 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 EFHBQ8N7U6 833 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 DDX27Q96GQ7 796 aaKnown RBP27.57■■■□□ 2
CPNE1-207ENST00000414664 TSPAN18Q96SJ8 248 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 HERC2P3Q9BVR0 1158 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 FGFBP2Q9BYJ0 223 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 AGO2Q9UKV8 859 aaKnown RBP27.57■■■□□ 2
CPNE1-207ENST00000414664 TRIP11Q15643 1979 aa27.57■■■□□ 2
CPNE1-207ENST00000414664 C2orf71A6NGG8 1288 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 HIDE1A8MVS5 230 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 FAM189A1O60320 539 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 ZNF202O95125 648 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 CXCL8P10145 99 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 PPP2R3AQ06190 1150 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 ADAM15Q13444 863 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 CTC1Q2NKJ3 1217 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 KRBA2Q6ZNG9 492 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 CD302Q8IX05 232 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 HPS3Q969F9 1004 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 ZMAT2Q96NC0 199 aaKnown RBP27.56■■■□□ 2
CPNE1-207ENST00000414664 ASB2Q96Q27 587 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 VN1R3Q9BXE9 311 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 GOLPH3LQ9H4A5 285 aa27.56■■■□□ 2
CPNE1-207ENST00000414664 CPSF3Q9UKF6 684 aaKnown RBP27.56■■■□□ 2
CPNE1-207ENST00000414664 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.55■■■□□ 2
CPNE1-207ENST00000414664 TTC26A0AVF1 554 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 PER2O15055 1255 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 URODP06132 367 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 GARTP22102 1010 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 GTF2F1P35269 517 aaKnown RBP eCLIP27.55■■■□□ 26e-10■■■□□ 14.7
CPNE1-207ENST00000414664 TNFSF9P41273 254 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 POU5F1Q01860 360 aaKnown RBP27.55■■■□□ 2
CPNE1-207ENST00000414664 EHHADHQ08426 723 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 KANK3Q6NY19 840 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 FUT10Q6P4F1 479 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 DCLRE1AQ6PJP8 1040 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 RABGGTAQ92696 567 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 CCDC47Q96A33 483 aaKnown RBP27.55■■■□□ 2
CPNE1-207ENST00000414664 PAAF1Q9BRP4 392 aa27.55■■■□□ 2
CPNE1-207ENST00000414664 MRPL17Q9NRX2 175 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms