RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 C17orf102A2RUQ5 167 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 VEGFAP15692 232 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-202ENST00000413872 SLC8A1P32418 973 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 SLC26A2P50443 739 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 AP1B1Q10567 949 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 TRAPPC11Q7Z392 1133 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 ZNF677Q86XU0 584 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 SYT2Q8N9I0 419 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-202ENST00000413872 DYRK4Q9NR20 520 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 PSMD3O43242 534 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 HSPA4LO95757 839 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 CASP2P42575 452 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 TPI1P60174 286 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 NFIAQ12857 509 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 STK4Q13043 487 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 CD302Q8IX05 232 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 RCOR2Q8IZ40 523 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 PCDHB2Q9Y5E7 798 aa18.29■□□□□ 0.52
PHRF1-202ENST00000413872 SYDE1Q6ZW31 735 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-202ENST00000413872 ABCB6Q9NP58 842 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 A0A087WUV0 522 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-202ENST00000413872 KRT14P02533 472 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 UCHL3P15374 230 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 PRAMEP78395 509 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 ASAP3Q8TDY4 903 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 TMEM60Q9H2L4 133 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 STAG3L1P0CL83 205 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 MYBP10242 640 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
PHRF1-202ENST00000413872 ATP11CQ8NB49 1132 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 SUN2Q9UH99 717 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 PCDHB8Q9UN66 801 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 HPS5Q9UPZ3 1129 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 SREBF1P36956 1147 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 PIGHQ14442 188 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-202ENST00000413872 STKLD1Q8NE28 680 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 SNF8Q96H20 258 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 PPP1R2P1Q96PQ5 205 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 NIF3L1Q9GZT8 377 aa18.28■□□□□ 0.52
PHRF1-202ENST00000413872 MSH4O15457 936 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 SENP7Q9BQF6 1050 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 SH2D3AQ9BRG2 576 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 SENP2Q9HC62 589 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 GPS1Q13098 491 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 MAPRE1Q15691 268 aaKnown RBP18.27■□□□□ 0.52
PHRF1-202ENST00000413872 ACCSLQ4AC99 568 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 SERPINI1Q99574 410 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 FBXO28Q9NVF7 368 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 DNAJC17Q9NVM6 304 aaKnown RBP18.27■□□□□ 0.52
PHRF1-202ENST00000413872 HLA-DRAP01903 254 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 SULT1E1P49888 294 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-202ENST00000413872 SLC12A1Q13621 1099 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 CATSPER3Q86XQ3 398 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 MOSPD1Q9UJG1 213 aa18.27■□□□□ 0.52
PHRF1-202ENST00000413872 KIF3CO14782 793 aa18.27■□□□□ 0.51
PHRF1-202ENST00000413872 PLSCR1O15162 318 aa18.27■□□□□ 0.51
PHRF1-202ENST00000413872 KPNA6O60684 536 aa18.27■□□□□ 0.51
PHRF1-202ENST00000413872 PDGFRAP16234 1089 aa18.27■□□□□ 0.51
PHRF1-202ENST00000413872 AAASQ9NRG9 546 aa18.27■□□□□ 0.51
PHRF1-202ENST00000413872 UBQLN1Q9UMX0 589 aaKnown RBP18.27■□□□□ 0.51
PHRF1-202ENST00000413872 PLAAQ9Y263 795 aa18.27■□□□□ 0.51
PHRF1-202ENST00000413872 CXCL11O14625 94 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 CTIFO43310 598 aaKnown RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ZNF211Q13398 564 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 KCNB2Q92953 911 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 GSTA4O15217 222 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 CLCN6P51797 869 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ANO4Q32M45 955 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 CCDC137Q6PK04 289 aaKnown RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 HPS3Q969F9 1004 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 MAP3K7O43318 606 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 CLNS1AP54105 237 aaKnown RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 NOP14P78316 857 aaKnown RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ART3Q13508 389 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 LAMB3Q13751 1172 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 KSR1Q8IVT5 923 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 PCSK9Q8NBP7 692 aaKnown RBP18.26■□□□□ 0.51
PHRF1-202ENST00000413872 RUBCNQ92622 972 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 TRIM54Q9BYV2 358 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 FGFR1OP2Q9NVK5 253 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 OCRLQ01968 901 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ANKRD20A4Q4UJ75 823 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ANKRD20A8PQ5CZ79 823 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ANKRD20A2Q5SQ80 823 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ANKRD20A1Q5TYW2 823 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 PID1Q7Z2X4 250 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 CFAP69A5D8W1 941 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 RASA4BC9J798 803 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 E5RI56 91 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 RASA4O43374 803 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms