RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
LITAF-203ENST00000413364 RNF14Q9UBS8 474 aa13.98□□□□□ -0.17
LITAF-203ENST00000413364 CNMDO75829 334 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 OATP04181 439 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 ATP4AP20648 1035 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 PAFAH1B1P43034 410 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 PAPOLAP51003 745 aaKnown RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 C2orf54Q08AI8 447 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 EMC2Q15006 297 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 ARHGAP44Q17R89 818 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 MTERF2Q49AM1 385 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 BRDTQ58F21 947 aaPredicted RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 CCDC181Q5TID7 509 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 CYB5D1Q6P9G0 228 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 MYLK4Q86YV6 388 aaPredicted RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 TMC2Q8TDI7 906 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 TMEM117Q9H0C3 514 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 UBE2TQ9NPD8 197 aaPredicted RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 GRIN2DO15399 1336 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 IGKV6D-21A0A0A0MT36 114 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 GOLGA6L10A6NI86 522 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 GNGT1P63211 74 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 GLYCTKQ8IVS8 523 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 ARHGEF19Q8IW93 802 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 SPATA4Q8NEY3 305 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 MIPOL1Q8TD10 442 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 MFSD14AQ96MC6 490 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 IQCGQ9H095 443 aaKnown RBP13.97□□□□□ -0.17
LITAF-203ENST00000413364 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
LITAF-203ENST00000413364 PYGBP11216 843 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 GARTP22102 1010 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 POLGP54098 1239 aaPredicted RBP13.96□□□□□ -0.17
LITAF-203ENST00000413364 ENPEPQ07075 957 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 SFSWAPQ12872 951 aaKnown RBP13.96□□□□□ -0.17
LITAF-203ENST00000413364 PPIL2Q13356 520 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 DBN1Q16643 649 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 THEMIS2Q5TEJ8 643 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 USP50Q70EL3 339 aaPredicted RBP13.96□□□□□ -0.17
LITAF-203ENST00000413364 ARHGAP22Q7Z5H3 698 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 LRRC57Q8N9N7 239 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 POMGNT1Q8WZA1 660 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 RMI1Q9H9A7 625 aa13.96□□□□□ -0.17
LITAF-203ENST00000413364 OPA1O60313 960 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 SMNDC1O75940 238 aaKnown RBP eCLIP13.95□□□□□ -0.18
LITAF-203ENST00000413364 SLC25A27O95847 323 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
LITAF-203ENST00000413364 CFAP221Q4G0U5 840 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 CCDC70Q6NSX1 233 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 MOB2Q70IA6 237 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 DNAAF5Q86Y56 855 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 TPCN2Q8NHX9 752 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 ZC3H15Q8WU90 426 aaKnown RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 ZFAND2BQ8WV99 257 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 KCNN1Q92952 543 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 NIFKQ9BYG3 293 aaKnown RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 DHX33Q9H6R0 707 aaKnown RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 GSTTP1A0A1W2PQM5 241 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 HNRNPDLO14979 420 aaKnown RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 LRRN2O75325 713 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 FARP2O94887 1054 aaPredicted RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 RPSAP08865 295 aaKnown RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 TPP2P29144 1249 aaPredicted RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 GTF2H1P32780 548 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 COPB2P35606 906 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 GALCP54803 685 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 TTLL12Q14166 644 aaPredicted RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 CCDC38Q502W7 563 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 USP37Q86T82 979 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 APLFQ8IW19 511 aaPredicted RBP13.95□□□□□ -0.18
LITAF-203ENST00000413364 CCDC127Q96BQ5 260 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 SCLT1Q96NL6 688 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 PORCNQ9H237 461 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 TMEM8AQ9HCN3 771 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 COQ4Q9Y3A0 265 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 NCANO14594 1321 aa13.95□□□□□ -0.18
LITAF-203ENST00000413364 PDLIM1O00151 329 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 TMEM253P0C7T8 217 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 TGFB3P10600 412 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 RANBP1P43487 201 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 LRRC23Q53EV4 343 aaPredicted RBP13.94□□□□□ -0.18
LITAF-203ENST00000413364 KRT39Q6A163 491 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 FUKQ8N0W3 1084 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 GPD1LQ8N335 351 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 BICD1Q96G01 975 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 PCYT2Q99447 389 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms