RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 NECTIN4Q96NY8 510 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 KLHL5Q96PQ7 755 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 S1PR5Q9H228 398 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 SLC38A7Q9NVC3 462 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 ANKFY1Q9P2R3 1169 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 CLDN3O15551 220 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 CNPP09543 421 aaKnown RBP17.18■□□□□ 0.34
MCF2L-211ENST00000413354 HARSP12081 509 aaKnown RBP17.18■□□□□ 0.34
MCF2L-211ENST00000413354 ALADP13716 330 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 USP49Q70CQ1 688 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 CEP120Q8N960 986 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 SNX27Q96L92 541 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 RIPOR3Q96MK2 946 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 ACAP3Q96P50 834 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
MCF2L-211ENST00000413354 ADAM7Q9H2U9 754 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 CHST7Q9NS84 486 aa17.18■□□□□ 0.34
MCF2L-211ENST00000413354 VWA8A3KMH1 1905 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 F8W810 466 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 TMEM189-UBE2V1I3L0A0 370 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 ABLIM1O14639 778 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 SPTLC2O15270 562 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 TRAK2O60296 914 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 KIF4AO95239 1232 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 YEATS4O95619 227 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 ZSCAN22P10073 491 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-211ENST00000413354 EPCAMP16422 314 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 STAT6P42226 847 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 MTHFRP42898 656 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
MCF2L-211ENST00000413354 LIG4P49917 911 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 CLCN4P51793 760 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 OSTNP61366 133 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 MCL1Q07820 350 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 NAB2Q15742 525 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 KYAT1Q16773 422 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 GLRA4Q5JXX5 417 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 SV2BQ7L1I2 683 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 TAS1R1Q7RTX1 841 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 FBXL18Q96ME1 805 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 APOL5Q9BWW9 433 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 GPR62Q9BZJ7 368 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 SFXN1Q9H9B4 322 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
MCF2L-211ENST00000413354 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-211ENST00000413354 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 LOC730098B7Z3J9 87 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 HNRNPDLO14979 420 aaKnown RBP17.16■□□□□ 0.34
MCF2L-211ENST00000413354 DCXO43602 365 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 PPP6R2O75170 966 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 GLUD1P00367 558 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 C1RP00736 705 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 XKR4Q5GH76 650 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 RARS2Q5T160 578 aaKnown RBP17.16■□□□□ 0.34
MCF2L-211ENST00000413354 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 ALKAL1Q6UXT8 129 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 RIN2Q8WYP3 895 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-211ENST00000413354 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
MCF2L-211ENST00000413354 PAAF1Q9BRP4 392 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 CNTN3Q9P232 1028 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 FNIP2Q9P278 1114 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 SEL1LQ9UBV2 794 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 TBX20Q9UMR3 447 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 NR2E1Q9Y466 385 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 C2orf16Q68DN1 1984 aa17.16■□□□□ 0.34
MCF2L-211ENST00000413354 TEX28O15482 410 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 F13A1P00488 732 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 PIGRP01833 764 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 KCNE1P15382 129 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 DCLRE1AQ6PJP8 1040 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 HASPINQ8TF76 798 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 RABGGTAQ92696 567 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 ZBTB45Q96K62 511 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-211ENST00000413354 TTPALQ9BTX7 342 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 CXCL16Q9H2A7 254 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 ST6GALNAC4Q9H4F1 302 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 EPHX3Q9H6B9 360 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 CACNG4Q9UBN1 327 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 C5orf42Q9H799 3197 aa17.15■□□□□ 0.34
MCF2L-211ENST00000413354 TRAPPC3O43617 180 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 B3GAT3O94766 335 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 CLTAP09496 248 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 GAP43P17677 238 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 GTF2BQ00403 316 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 ATAT1Q5SQI0 421 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-211ENST00000413354 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-211ENST00000413354 MAP4K3Q8IVH8 894 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms