RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 COL4A3BPQ9Y5P4 624 aa9.46□□□□□ -0.9
CCDC196-203ENST00000411796 MROH7Q68CQ1 1323 aa9.46□□□□□ -0.9
CCDC196-203ENST00000411796 PLXNA1Q9UIW2 1896 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 SMIM35A0A1B0GVV1 85 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 ZNF862O60290 1169 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 ELNP15502 786 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 PLCG1P19174 1290 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 COL8A1P27658 744 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CNGA1P29973 690 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CDK7P50613 346 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 POU5F1Q01860 360 aaKnown RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 GRIN1Q05586 938 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 PPP2R5AQ15172 486 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CCDC183Q5T5S1 534 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 PEAR1Q5VY43 1037 aaPredicted RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CEP135Q66GS9 1140 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 GDF6Q6KF10 455 aaPredicted RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 RINT1Q6NUQ1 792 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 ADAMTSL4Q6UY14 1074 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 STXBP4Q6ZWJ1 553 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 NPAS4Q8IUM7 802 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CCDC60Q8IWA6 550 aaPredicted RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CCDC65Q8IXS2 484 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 RASSF8Q8NHQ8 419 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 POP1Q99575 1024 aaKnown RBP9.45□□□□□ -0.9
CCDC196-203ENST00000411796 RNF208Q9H0X6 261 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 CLSTN2Q9H4D0 955 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 RGL1Q9NZL6 768 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 PCDHA2Q9Y5H9 948 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 LRRC37A2A6NM11 1700 aa9.45□□□□□ -0.9
CCDC196-203ENST00000411796 ARHGEF35A5YM69 484 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 RHOBTB3O94955 611 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 ASGR1P07306 291 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 C6orf222P0C671 652 aaPredicted RBP9.44□□□□□ -0.9
CCDC196-203ENST00000411796 CCL5P13501 91 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 EDN3P14138 238 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 CCND3P30281 292 aaPredicted RBP9.44□□□□□ -0.9
CCDC196-203ENST00000411796 MYBPC2Q14324 1141 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 KARSQ15046 597 aaKnown RBP9.44□□□□□ -0.9
CCDC196-203ENST00000411796 POSTNQ15063 836 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 PLCB4Q15147 1175 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 LRRC41Q15345 812 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 KCNA10Q16322 511 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 ODR4Q5SWX8 454 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 USP49Q70CQ1 688 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 DMRTC2Q8IXT2 367 aaPredicted RBP9.44□□□□□ -0.9
CCDC196-203ENST00000411796 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 MLKLQ8NB16 471 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 GPT2Q8TD30 523 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 KAT2BQ92831 832 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 HVCN1Q96D96 273 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 CEP170P1Q96L14 293 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 TRIM9Q9C026 710 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 INO80BQ9C086 356 aaPredicted RBP9.44□□□□□ -0.9
CCDC196-203ENST00000411796 NUP62CLQ9H1M0 184 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 SYNRGQ9UMZ2 1314 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 LCTP09848 1927 aa9.44□□□□□ -0.9
CCDC196-203ENST00000411796 ANKRD33BA6NCL7 494 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 KBTBD13C9JR72 458 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 PIK3R2O00459 728 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 INSRRP14616 1297 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 LIG1P18858 919 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 CDC25AP30304 524 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 ARL2P36404 184 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 EFNA5P52803 228 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 ACLYP53396 1101 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 PRKCEQ02156 737 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 ENPEPQ07075 957 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 RBL2Q08999 1139 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 GIT2Q14161 759 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 CTTNQ14247 550 aaKnown RBP9.43□□□□□ -0.9
CCDC196-203ENST00000411796 ARSHQ5FYA8 562 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 XKR9Q5GH70 373 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 ANKRD33Q7Z3H0 272 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 RSPH3Q86UC2 560 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 ZNF410Q86VK4 478 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 C7orf31Q8N865 590 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 DNAJC19Q96DA6 116 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 HHIPQ96QV1 700 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 OSMRQ99650 979 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 BHMT2Q9H2M3 363 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 PARVGQ9HBI0 331 aa9.43□□□□□ -0.9
CCDC196-203ENST00000411796 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
CCDC196-203ENST00000411796 E9PMD0 336 aa9.42□□□□□ -0.9
CCDC196-203ENST00000411796 ARVCFO00192 962 aa9.42□□□□□ -0.9
CCDC196-203ENST00000411796 KIAA0391O15091 583 aaKnown RBP9.42□□□□□ -0.9
CCDC196-203ENST00000411796 EIF3DO15371 548 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCDC196-203ENST00000411796 ADCY6O43306 1168 aa9.42□□□□□ -0.9
CCDC196-203ENST00000411796 CHMP2AO43633 222 aa9.42□□□□□ -0.9
CCDC196-203ENST00000411796 SMNDC1O75940 238 aaKnown RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms