RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 UBL4BQ8N7F7 174 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 CCDC26Q8TAB7 109 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 WHAMMQ8TF30 809 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 SAAL1Q96ER3 474 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 MS4A4AQ96JQ5 239 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
LIMS1-205ENST00000410093 NOCTQ9UK39 431 aaKnown RBP14.61□□□□□ -0.07
LIMS1-205ENST00000410093 ASAP2O43150 1006 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 CNMDO75829 334 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 GGPS1O95749 300 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 FTLP02792 175 aaPredicted RBP14.6□□□□□ -0.07
LIMS1-205ENST00000410093 TBXAS1P24557 533 aaPredicted RBP14.6□□□□□ -0.07
LIMS1-205ENST00000410093 TNNT3P45378 269 aaPredicted RBP14.6□□□□□ -0.07
LIMS1-205ENST00000410093 CCNA1P78396 465 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 SP4Q02446 784 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 TAF1CQ15572 869 aaPredicted RBP14.6□□□□□ -0.07
LIMS1-205ENST00000410093 ZACNQ401N2 412 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 CELF3Q5SZQ8 465 aaKnown RBP14.6□□□□□ -0.07
LIMS1-205ENST00000410093 TRIM72Q6ZMU5 477 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 TAS1R3Q7RTX0 852 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 EXOC4Q96A65 974 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 KREMEN1Q96MU8 473 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 MMP19Q99542 508 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 FAM213AQ9BRX8 229 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 KIFC3Q9BVG8 833 aa14.6□□□□□ -0.07
LIMS1-205ENST00000410093 SEPT11Q9NVA2 429 aaKnown RBP14.6□□□□□ -0.07
LIMS1-205ENST00000410093 A0A0B4J269 797 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 GOLGA6L10A0A0M3HER8 536 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 LRRIQ4A6NIV6 560 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 NOP56O00567 594 aaKnown RBP14.59□□□□□ -0.07
LIMS1-205ENST00000410093 CEP104O60308 925 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 BUB1BO60566 1050 aaPredicted RBP14.59□□□□□ -0.07
LIMS1-205ENST00000410093 CYP11B1P15538 503 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 TCF7P36402 384 aaPredicted RBP14.59□□□□□ -0.07
LIMS1-205ENST00000410093 POU5F1Q01860 360 aaKnown RBP14.59□□□□□ -0.07
LIMS1-205ENST00000410093 CRHR2Q13324 411 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 TRMT1LQ7Z2T5 733 aaKnown RBP14.59□□□□□ -0.07
LIMS1-205ENST00000410093 ZBTB8OSQ8IWT0 167 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 MREGQ8N565 214 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 METTL13Q8N6R0 699 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 TAS1R2Q8TE23 839 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 ATP8B4Q8TF62 1192 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 BRI3BPQ8WY22 251 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 MS4A14Q96JA4 679 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 RUNDC3BQ96NL0 473 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 PSMB7Q99436 277 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 PTPN18Q99952 460 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 PLVAPQ9BX97 442 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 MRPL4Q9BYD3 311 aaKnown RBP14.59□□□□□ -0.07
LIMS1-205ENST00000410093 WNT8AQ9H1J5 351 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 SMARCAD1Q9H4L7 1026 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 PDE11AQ9HCR9 933 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 LCMT1Q9UIC8 334 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 GTF3C4Q9UKN8 822 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 PCDHB2Q9Y5E7 798 aa14.59□□□□□ -0.07
LIMS1-205ENST00000410093 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 OPA1O60313 960 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 C4BPAP04003 597 aaKnown RBP14.58□□□□□ -0.08
LIMS1-205ENST00000410093 CYP1A2P05177 515 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 MATR3P43243 847 aaKnown RBP eCLIP14.58□□□□□ -0.08
LIMS1-205ENST00000410093 POU5F1BQ06416 359 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 TFDP1Q14186 410 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 CDCA2Q69YH5 1023 aaPredicted RBP14.58□□□□□ -0.08
LIMS1-205ENST00000410093 ASAP3Q8TDY4 903 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 SEMA4DQ92854 862 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 FAXDC2Q96IV6 333 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 PCYT2Q99447 389 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 CGRRF1Q99675 332 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 MSTO1Q9BUK6 570 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 THAP2Q9H0W7 228 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.58□□□□□ -0.08
LIMS1-205ENST00000410093 CTTNBP2NLQ9P2B4 639 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 RBPJLQ9UBG7 517 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 DMGDHQ9UI17 866 aaKnown RBP14.58□□□□□ -0.08
LIMS1-205ENST00000410093 HPCAL4Q9UM19 191 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 ADGRA2Q96PE1 1338 aa14.58□□□□□ -0.08
LIMS1-205ENST00000410093 TOM1L1O75674 476 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 HEXIM1O94992 359 aaKnown RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 DLATP10515 647 aaKnown RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 CHRNB2P17787 502 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 TNNI1P19237 187 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 GBP1P32455 592 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 USP8P40818 1118 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 SP3Q02447 781 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 ACAD10Q6JQN1 1059 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 NOP9Q86U38 636 aaKnown RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 EFCAB13Q8IY85 973 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 ABRAQ8N0Z2 381 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 TMEM143Q96AN5 459 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 VCPIP1Q96JH7 1222 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 GPR20Q99678 358 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 IMPG2Q9BZV3 1241 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 R3HDMLQ9H3Y0 253 aa14.57□□□□□ -0.08
LIMS1-205ENST00000410093 ZCCHC17Q9NP64 241 aaKnown RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 AVENQ9NQS1 362 aaPredicted RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms