RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GDF10P55107 478 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SP2Q02086 613 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 APBA1Q02410 837 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SNAPC2Q13487 334 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 KCTD2Q14681 263 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 DRAP1Q14919 205 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 EMC2Q15006 297 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 EPC2Q52LR7 807 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 KRT39Q6A163 491 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SLFN12LQ6IEE8 588 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 WDR93Q6P2C0 686 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SEPT14Q6ZU15 432 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 H2AFVQ71UI9 128 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 GPD1LQ8N335 351 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 MORC4Q8TE76 937 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SEPT1Q8WYJ6 367 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 OPTNQ96CV9 577 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 MFSD14AQ96MC6 490 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 POLR3FQ9H1D9 316 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 PORCNQ9H237 461 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 IKZF4Q9H2S9 585 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 MLXIPQ9HAP2 919 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 TMEM8AQ9HCN3 771 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 TFR2Q9UP52 801 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 STYXL1Q9Y6J8 313 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 DNMT3AQ9Y6K1 912 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 GOLGB1Q14789 3259 aaKnown RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 DNAJC25-GNG10A0A024R161 153 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 HNRNPDLO14979 420 aaKnown RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ICMTO60725 284 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ZC3H11AO75152 810 aaKnown RBP eCLIP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ZRANB2O95218 330 aaKnown RBP eCLIP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ADH1CP00326 375 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 LDHAP00338 332 aaKnown RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ZSCAN20P17040 1043 aaPredicted RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 KLRC1P26715 233 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ADSSP30520 456 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 PAFAH1B1P43034 410 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 STAT5BP51692 787 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 NAP1L1P55209 391 aaKnown RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 STRN3Q13033 797 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 MTMR3Q13615 1198 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 MOGSQ13724 837 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 KIF22Q14807 665 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 PPP1R26Q5T8A7 1209 aaPredicted RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 ENOSF1Q7L5Y1 443 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 TNS4Q8IZW8 715 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 SYCE1Q8N0S2 351 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 MSL3Q8N5Y2 521 aaKnown RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 SLC30A5Q8TAD4 765 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 CAGE1Q8TC20 777 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 BSNDQ8WZ55 320 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 POMGNT1Q8WZA1 660 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 CLMNQ96JQ2 1002 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 OSBPL9Q96SU4 736 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 JPH2Q9BR39 696 aaPredicted RBP8.1□□□□□ -1.11
CXCR4-202ENST00000409817 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 AZI2Q9H6S1 392 aa8.1□□□□□ -1.11
CXCR4-202ENST00000409817 GSTTP1A0A1W2PQM5 241 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 GRID2IPA4D2P6 1211 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 ASB14A6NK59 587 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 LRRC37A2A6NM11 1700 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 H3BRB1 525 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 ARL2P36404 184 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 GPC3P51654 580 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 FKBP1BP68106 108 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 CCNA1P78396 465 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 SP4Q02446 784 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 PPP3CAQ08209 521 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 TARBP2Q15633 366 aaKnown RBP8.09□□□□□ -1.11
CXCR4-202ENST00000409817 MTERF2Q49AM1 385 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 C1orf220Q5T0J3 134 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 CC2D1AQ6P1N0 951 aaPredicted RBP8.09□□□□□ -1.11
CXCR4-202ENST00000409817 PLPPR4Q7Z2D5 763 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 KRT222Q8N1A0 295 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 TCP11Q8WWU5 503 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 MMP19Q99542 508 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 SYT11Q9BT88 431 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 TMEM117Q9H0C3 514 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 TAF1DQ9H5J8 278 aaPredicted RBP8.09□□□□□ -1.11
CXCR4-202ENST00000409817 TUT1Q9H6E5 874 aaKnown RBP8.09□□□□□ -1.11
CXCR4-202ENST00000409817 ANKZF1Q9H8Y5 726 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 FAM53CQ9NYF3 392 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 RBPJLQ9UBG7 517 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 HDAC6Q9UBN7 1215 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 MYH10P35580 1976 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 DOCK5Q9H7D0 1870 aa8.09□□□□□ -1.11
CXCR4-202ENST00000409817 ZNF233A6NK53 670 aa8.09□□□□□ -1.12
CXCR4-202ENST00000409817 ANKRD63C9JTQ0 380 aa8.09□□□□□ -1.12
CXCR4-202ENST00000409817 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.12
CXCR4-202ENST00000409817 EXTL3O43909 919 aa8.09□□□□□ -1.12
CXCR4-202ENST00000409817 GRIN3BO60391 1043 aa8.09□□□□□ -1.12
CXCR4-202ENST00000409817 MAFO75444 373 aaPredicted RBP8.09□□□□□ -1.12
CXCR4-202ENST00000409817 PALMO75781 387 aa8.09□□□□□ -1.12
CXCR4-202ENST00000409817 GGPS1O95749 300 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms