RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GLYCTKQ8IVS8 523 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 TMX3Q96JJ7 454 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 CCDC94Q9BW85 323 aaPredicted RBP16.2■□□□□ 0.18
CBX3-203ENST00000409747 KMT5AQ9NQR1 393 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 CACNG4Q9UBN1 327 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 ZDBF2Q9HCK1 2354 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 MYO10Q9HD67 2058 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 TMEM189-UBE2V1I3L0A0 370 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 SPATA31D3P0C874 917 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 GBP2P32456 591 aaPredicted RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 PSMD5Q16401 504 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 ZNF568Q3ZCX4 644 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 LIN9Q5TKA1 542 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 RINT1Q6NUQ1 792 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 LILRA6Q6PI73 481 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 PRSS55Q6UWB4 352 aaPredicted RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 SPATA31D4Q6ZUB0 917 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 FEZF2Q8TBJ5 459 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 MFSD1Q9H3U5 465 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 POLD4Q9HCU8 107 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 ARHGAP28Q9P2N2 729 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 PDGFBP01127 241 aaPredicted RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 RPL17P18621 184 aaKnown RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 GUCY2CP25092 1073 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 GJB2P29033 226 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 GRM5P41594 1212 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 IL17AQ16552 155 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 HYIQ5T013 277 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 DAW1Q8N136 415 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 ZNF707Q96C28 371 aaPredicted RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 CDK5RAP3Q96JB5 506 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 ACO2Q99798 780 aaKnown RBP16.19■□□□□ 0.18
CBX3-203ENST00000409747 RUSC1Q9BVN2 902 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 PRKD2Q9BZL6 878 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 KCNK12Q9HB15 430 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.19■□□□□ 0.182e-20■■■■■ 40.5
CBX3-203ENST00000409747 KCND2Q9NZV8 630 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 EPS15L1Q9UBC2 864 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 FBXW11Q9UKB1 542 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 DUSP12Q9UNI6 340 aa16.19■□□□□ 0.18
CBX3-203ENST00000409747 TRAPPC3O43617 180 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 ZMYND10O75800 440 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 MYBP10242 640 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 CDC25AP30304 524 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 ZRSR1Q15695 479 aaKnown RBP16.18■□□□□ 0.18
CBX3-203ENST00000409747 GLRA4Q5JXX5 417 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 DCLRE1AQ6PJP8 1040 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 C1orf186Q6ZWK4 172 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
CBX3-203ENST00000409747 NXPE3Q969Y0 559 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
CBX3-203ENST00000409747 CDT1Q9H211 546 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 SMOC2Q9H3U7 446 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 SLC38A7Q9NVC3 462 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
CBX3-203ENST00000409747 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.18■□□□□ 0.18
CBX3-203ENST00000409747 B3GAT3O94766 335 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 HNRNPA1P09651 372 aaKnown RBP eCLIP16.17■□□□□ 0.18
CBX3-203ENST00000409747 MCF2P10911 925 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 SMTNP53814 917 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 TCF15Q12870 199 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 STRN3Q13033 797 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 MAPK7Q13164 816 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 TCHPQ9BT92 498 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 PTPRHQ9HD43 1115 aa16.17■□□□□ 0.18
CBX3-203ENST00000409747 VWA3AA6NCI4 1184 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 SLC26A4O43511 780 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 HOXA9P31269 272 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 CLCNKBP51801 687 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 ASTLQ6HA08 431 aaPredicted RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 MPZL3Q6UWV2 235 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 KCNK18Q7Z418 384 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 SYT2Q8N9I0 419 aaPredicted RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 SPIRE2Q8WWL2 714 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 DDX27Q96GQ7 796 aaKnown RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 AK8Q96MA6 479 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 CLSTN3Q9BQT9 956 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 NTPCRQ9BSD7 190 aaKnown RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 TARS2Q9BW92 718 aaKnown RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 CXCL16Q9H2A7 254 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 FBXL21Q9UKT6 434 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 ZFP37Q9Y6Q3 630 aaPredicted RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 GALR2O43603 387 aaPredicted RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 N4BP1O75113 896 aaKnown RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 PLS3P13797 630 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 FGFR3P22607 806 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 CLCN5P51795 746 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 UPP1Q16831 310 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 XKR4Q5GH76 650 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 PPM1LQ5SGD2 360 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 GET4Q7L5D6 327 aaPredicted RBP16.16■□□□□ 0.18
CBX3-203ENST00000409747 ACAP3Q96P50 834 aa16.16■□□□□ 0.18
CBX3-203ENST00000409747 VWA8A3KMH1 1905 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 H0YCG3 227 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 SLC16A4O15374 487 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms