RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 KLHL29Q96CT2 875 aa26.51■■□□□ 1.83
SPIRE1-202ENST00000409402 UPF3AQ9H1J1 476 aaKnown RBP26.51■■□□□ 1.83
SPIRE1-202ENST00000409402 DNAJC6O75061 913 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 MMP14P50281 582 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 SNCBQ16143 134 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 ACAD11Q709F0 780 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 RDM1Q8NG50 284 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 A0A087WUV0 522 aaPredicted RBP26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 C17orf102A2RUQ5 167 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 KCTD17Q8N5Z5 321 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 PPP4CP60510 307 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 DEFB132Q7Z7B7 95 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 RAB42Q8N4Z0 105 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 TEX33O43247 280 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 INPP1P49441 399 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 MRPS25P82663 173 aaKnown RBP26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 ARID5BQ14865 1188 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 ZKSCAN4Q969J2 545 aaPredicted RBP26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 OSBPL9Q96SU4 736 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 PCSK1P29120 753 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 NOTUMQ6P988 496 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 SNF8Q96H20 258 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 ZNF512Q96ME7 567 aaPredicted RBP26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 TRAIPQ9BWF2 469 aa26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 PACSIN2Q9UNF0 486 aaPredicted RBP26.5■■□□□ 1.83
SPIRE1-202ENST00000409402 MAPK13O15264 365 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 OR1G1P47890 313 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 KCNH7Q9NS40 1196 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 FAM205CA6NFA0 338 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 PIK3R2O00459 728 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 GYS1P13807 737 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 LRRC71Q8N4P6 559 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 SNRPFP62306 86 aaKnown RBP26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 PDIA2Q13087 525 aaKnown RBP26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 FAM133BQ5BKY9 247 aaKnown RBP26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 DCUN1D1Q96GG9 259 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 STK33Q9BYT3 514 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 TRIM55Q9BYV6 548 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 PPP1R9AQ9ULJ8 1098 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 ANP32DO95626 131 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 PDGFRBP09619 1106 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 CAP2P40123 477 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 TAAR1Q96RJ0 339 aa26.49■■□□□ 1.83
SPIRE1-202ENST00000409402 STMN1P16949 149 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 ANKEF1Q9NU02 776 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 AFF4Q9UHB7 1163 aaKnown RBP26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 CAPN11Q9UMQ6 739 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 IGSF9BQ9UPX0 1349 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 ICAM1P05362 532 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 RGS7P49802 495 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 KRT82Q9NSB4 513 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 FAM187AA6NFU0 413 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 NCK2O43639 380 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 FSCBQ5H9T9 825 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 HPS3Q969F9 1004 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 CYP2C19P33261 490 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 FMO5P49326 533 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 PMS2P54278 862 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 PTK2BQ14289 1009 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 NUGGCQ68CJ6 796 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 NCLNQ969V3 563 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 APOBEC2Q9Y235 224 aaKnown RBP26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 TCF7P36402 384 aaPredicted RBP26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 NFRKBQ6P4R8 1299 aa26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 ZC3H18Q86VM9 953 aaKnown RBP26.48■■□□□ 1.83
SPIRE1-202ENST00000409402 RPS6P62753 249 aaKnown RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 EPM2AIP1Q7L775 607 aaPredicted RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 PITPNM3Q9BZ71 974 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 SLC7A5P2Q9GIP4 190 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 FGFR1OP2Q9NVK5 253 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 ERO1BQ86YB8 467 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 CCNYL1Q8N7R7 359 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 RBBP8NLQ8NC74 664 aaPredicted RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 EPHX2P34913 555 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 MGAT5BQ3V5L5 792 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 CCDC137Q6PK04 289 aaKnown RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 PLEKHH3Q7Z736 793 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 METTL16Q86W50 562 aaKnown RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 LRRC43Q8N309 656 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 SPECC1L-ADORA2AF8WAN1 911 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 HMBSP08397 361 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 MYBP10242 640 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 PDGFRAP16234 1089 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 EIF3EP60228 445 aaKnown RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 LBRQ14739 615 aaKnown RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 THEMIS2Q5TEJ8 643 aa26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 DHX40Q8IX18 779 aaKnown RBP26.47■■□□□ 1.83
SPIRE1-202ENST00000409402 CNTNAP5Q8WYK1 1306 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 AP3B1O00203 1094 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 ZBED8Q8IZ13 594 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 ATP11CQ8NB49 1132 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 SH3BP1Q9Y3L3 701 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 EIF3DO15371 548 aaKnown RBP eCLIP26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 KRT17Q04695 432 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 PPHLN1Q8NEY8 458 aaKnown RBP26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 NT5C1AQ9BXI3 368 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 AAASQ9NRG9 546 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 SH3BGRP55822 239 aaPredicted RBP26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 NOP14P78316 857 aaKnown RBP26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 PDIA6Q15084 440 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms