RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 AMHP03971 560 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 NFICP08651 508 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 EPB41P11171 864 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 ATP1A3P13637 1013 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 PSMC2P35998 433 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 SCNN1GP51170 649 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 GUCY2FP51841 1108 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 YARSP54577 528 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 CYP24A1Q07973 514 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 NFIL3Q16649 462 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 DCAF17Q5H9S7 520 aaPredicted RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 SCARA3Q6AZY7 606 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 JADE1Q6IE81 842 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 MRPL10Q7Z7H8 261 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 SNX27Q96L92 541 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 ZMAT2Q96NC0 199 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 BPIFA3Q9BQP9 254 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 TRAIPQ9BWF2 469 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 TMEM161AQ9NX61 479 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 TDRD15B5MCY1 1934 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 PTPRJQ12913 1337 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 ARL5CA6NH57 179 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 GRXCR1A8MXD5 290 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 BAIAP3O94812 1187 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 TCERG1LQ5VWI1 586 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 FAM109BQ6ICB4 259 aaPredicted RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 FILIP1Q7Z7B0 1213 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 BRSK2Q8IWQ3 736 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 HERVK_113Q902F9 699 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 RABGGTAQ92696 567 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 PGBD4Q96DM1 585 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 RNPC3Q96LT9 517 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 CEP63Q96MT8 703 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 GDF15Q99988 308 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 PDCD11Q14690 1871 aaKnown RBP15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 FNDC1Q4ZHG4 1894 aaPredicted RBP15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 TTC26A0AVF1 554 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 KCNJ18B7U540 433 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 PTGESO14684 152 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 OFD1O75665 1012 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 SKIP12755 728 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 RABGGTBP53611 331 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 PPP2R3AQ06190 1150 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 KCNJ12Q14500 433 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 CT47A1Q5JQC4 288 aaPredicted RBP15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 NPAS4Q8IUM7 802 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 EFCAB13Q8IY85 973 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 HACE1Q8IYU2 909 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 CRIPAKQ8N1N5 446 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 GSTCDQ8NEC7 633 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 TOP1MTQ969P6 601 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 ELMO3Q96BJ8 720 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 RPS6KC1Q96S38 1066 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 THAP9Q9H5L6 903 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 GOLGA2P5Q9HBQ8 144 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 SLC4A7Q9Y6M7 1214 aa15.31■□□□□ 0.04
CHRNA1-204ENST00000409323 LRRIQ3A6PVS8 624 aaPredicted RBP15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 SMTNL1A8MU46 457 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 IKBKBO14920 756 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 KIAA0391O15091 583 aaKnown RBP15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 EOMESO95936 686 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 MTIF2P46199 727 aaKnown RBP15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 VAMP7P51809 220 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 BFSP1Q12934 665 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 MYBPC2Q14324 1141 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 C1orf220Q5T0J3 134 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 BORCS6Q96GS4 357 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 MFSD14AQ96MC6 490 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 KIAA1586Q9HCI6 787 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 TAB2Q9NYJ8 693 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 MAGEC2Q9UBF1 373 aaPredicted RBP15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 TUBGCP4Q9UGJ1 667 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 ARMCX3Q9UH62 379 aaPredicted RBP15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 GBF1Q92538 1859 aa15.3■□□□□ 0.04
CHRNA1-204ENST00000409323 COL4A6Q14031 1691 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 GOLGA6L19H0YKK7 550 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 SLC16A3O15427 465 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 B4GALT3O60512 393 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 FGFR1OPO95684 399 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 KRT13P13646 458 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 MYOGP15173 224 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 TNNI1P19237 187 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 CDK11BP21127 795 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 SOX4Q06945 474 aaPredicted RBP15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 PSMD6Q15008 389 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 GLB1LQ6UWU2 654 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 ALKAL1Q6UXT8 129 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms