RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 RAG1P15918 1043 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CLCN6P51797 869 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 EPHB3P54753 998 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CASP6P55212 293 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CAV3P56539 151 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 EIF4A1P60842 406 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 GABPB1Q06547 395 aaPredicted RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 CUL3Q13618 768 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 HDDC3Q8N4P3 179 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 WDR60Q8WVS4 1066 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 RAPGEF5Q92565 580 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 GPR63Q9BZJ6 419 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CRYL1Q9Y2S2 319 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 GDAQ9Y2T3 454 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 GCFC2P16383 781 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 CD58P19256 250 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 NAALADL2Q58DX5 795 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 RD3Q7Z3Z2 195 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 SSH3Q8TE77 659 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 FRMD8Q9BZ67 464 aaPredicted RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 BAIAP2L1Q9UHR4 511 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 AP3D1O14617 1153 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 PCDH8O95206 1070 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 URODP06132 367 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 C6orf222P0C671 652 aaPredicted RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 USP17L8P0C7I0 530 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 NCAM1P13591 858 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 DGKZQ13574 1117 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CREB3L3Q68CJ9 461 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 BRIP1Q9BX63 1249 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 INTS7Q9NVH2 962 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 TRIM38O00635 465 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 GGPS1O95749 300 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 MOCS2O96007 188 aaPredicted RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 CAPRIN2Q6IMN6 1127 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 LYSMD3Q7Z3D4 306 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 NGRNQ9NPE2 291 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 SH3GLB1Q9Y371 365 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CLDN3O15551 220 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 RNMTO43148 476 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 SLFN5Q08AF3 891 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 ELF2Q15723 593 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 SIX5Q8N196 739 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 CEP95Q96GE4 821 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.57□□□□□ -1.84
NEB-204ENST00000409198 KRT84Q9NSB2 600 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 DCDC2Q9UHG0 476 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 SYNPO2Q9UMS6 1093 aa3.57□□□□□ -1.84
NEB-204ENST00000409198 FLT1P17948 1338 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 LRRD1A4D1F6 860 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ADCY6O43306 1168 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 FAM200BP0CF97 657 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 AMD1P17707 334 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PSMA2P25787 234 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RRM2P31350 389 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RPS6KA3P51812 740 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 NPEPPSP55786 919 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TBL3Q12788 808 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 NFIAQ12857 509 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TRMT44Q8IYL2 757 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 SLC20A1Q8WUM9 679 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SEPT5Q99719 369 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 SLITRK2Q9H156 845 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZHX2Q9Y6X8 837 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ABCA8O94911 1581 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PRODHO43272 600 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 XYLBO75191 536 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TAF5LO75529 589 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CBX5P45973 191 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CDKL3Q8IVW4 592 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 BRD8Q9H0E9 1235 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZNF302Q9NR11 478 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 YTHDC2Q9H6S0 1430 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 EVPLLA8MZ36 301 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PJA2O43164 708 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 DAB1O75553 588 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TNFRSF8P28908 595 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 UBE3AQ05086 875 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RUNX1T1Q06455 604 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TBC1D10BQ4KMP7 808 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 HERC6Q8IVU3 1022 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MTSS1O43312 755 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CYP7B1O75881 506 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SCP2P22307 547 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CPT1AP50416 773 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PDAP1Q13442 181 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 BYSLQ13895 437 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 ANO1Q5XXA6 986 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZNF655Q8N720 491 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 RFWD2Q8NHY2 731 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RUBCNQ92622 972 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ELOVL2Q9NXB9 296 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HIST1H2ABP04908 130 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RPLP2P05387 115 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 ADD1P35611 737 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 FNTAP49354 379 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 APLP1P51693 650 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SNAPC2Q13487 334 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms