RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 PHLPP2Q6ZVD8 1323 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 CUL9Q8IWT3 2517 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 BMPR1AP36894 532 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 DRP2Q13474 957 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 MXD4Q14582 209 aaPredicted RBP18.2■□□□□ 0.5
CGREF1-206ENST00000405600 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 ZC2HC1CQ53FD0 456 aaPredicted RBP18.2■□□□□ 0.5
CGREF1-206ENST00000405600 FAM228AQ86W67 206 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 LRRC8AQ8IWT6 810 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 ZNF689Q96CS4 500 aaPredicted RBP18.2■□□□□ 0.5
CGREF1-206ENST00000405600 MRPL38Q96DV4 380 aaKnown RBP18.2■□□□□ 0.5
CGREF1-206ENST00000405600 NECAB3Q96P71 396 aaPredicted RBP18.2■□□□□ 0.5
CGREF1-206ENST00000405600 MKNK1Q9BUB5 465 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 INTS13Q9NVM9 706 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 FRMD4BQ9Y2L6 1034 aa18.2■□□□□ 0.5
CGREF1-206ENST00000405600 TTC3P53804 2025 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 TNFRSF10AO00220 468 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 HOXD13P35453 343 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 NAMPTP43490 491 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 NLRP4Q96MN2 994 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 ALG13Q9NP73 1137 aaKnown RBP18.19■□□□□ 0.5
CGREF1-206ENST00000405600 GPRC5CQ9NQ84 441 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 ARMCX3Q9UH62 379 aaPredicted RBP18.19■□□□□ 0.5
CGREF1-206ENST00000405600 RWDD3Q9Y3V2 267 aa18.19■□□□□ 0.5
CGREF1-206ENST00000405600 MRPL42Q9Y6G3 142 aaKnown RBP18.19■□□□□ 0.5
CGREF1-206ENST00000405600 TBKBP1A7MCY6 615 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 SLC16A4O15374 487 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 TEX33O43247 280 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 BMP1P13497 986 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 ZSCAN20P17040 1043 aaPredicted RBP18.18■□□□□ 0.5
CGREF1-206ENST00000405600 FGFR4P22455 802 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 PSMC2P35998 433 aaKnown RBP18.18■□□□□ 0.5
CGREF1-206ENST00000405600 PBX1P40424 430 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 NPTX2P47972 431 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 TBX2Q13207 712 aaPredicted RBP18.18■□□□□ 0.5
CGREF1-206ENST00000405600 TFDP1Q14186 410 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 SLC9A9Q8IVB4 645 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 C12orf56Q8IXR9 622 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 RNF169Q8NCN4 708 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 DEPTORQ8TB45 409 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 TMEM174Q8WUU8 243 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
CGREF1-206ENST00000405600 KCNN1Q92952 543 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 TMEM143Q96AN5 459 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 CCDC51Q96ER9 411 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 C11orf84Q9BUA3 381 aaPredicted RBP18.18■□□□□ 0.5
CGREF1-206ENST00000405600 NDST4Q9H3R1 872 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 XPNPEP1Q9NQW7 623 aa18.18■□□□□ 0.5
CGREF1-206ENST00000405600 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.18■□□□□ 0.5
CGREF1-206ENST00000405600 SPTBN5Q9NRC6 3674 aaKnown RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 A0A087WZ62 844 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 AKR1B15C9JRZ8 316 aaPredicted RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 GRM6O15303 877 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 CSDE1O75534 798 aaKnown RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 RB1P06400 928 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 KCNA5P22460 613 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 PHKA2P46019 1235 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 LAMTOR4Q0VGL1 99 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 STRN3Q13033 797 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 PCBP1Q15365 356 aaKnown RBP eCLIP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 CEP135Q66GS9 1140 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 SLC24A5Q71RS6 500 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 SRGAP1Q7Z6B7 1085 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 CNGA4Q8IV77 575 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 TMEM161BQ8NDZ6 487 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 PCMTD1Q96MG8 357 aaPredicted RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 ERGIC2Q96RQ1 377 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 FDXACB1Q9BRP7 624 aaPredicted RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 IGFLR1Q9H665 355 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 UBE2ZQ9H832 354 aaPredicted RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 RC3H2Q9HBD1 1191 aaKnown RBP18.17■□□□□ 0.5
CGREF1-206ENST00000405600 AGPAT3Q9NRZ7 376 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 RGS18Q9NS28 235 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 TBX20Q9UMR3 447 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 ZMYM2Q9UBW7 1377 aa18.17■□□□□ 0.5
CGREF1-206ENST00000405600 TGFB1I1O43294 461 aa18.16■□□□□ 0.5
CGREF1-206ENST00000405600 ARL2P36404 184 aa18.16■□□□□ 0.5
CGREF1-206ENST00000405600 POU5F1BQ06416 359 aa18.16■□□□□ 0.5
CGREF1-206ENST00000405600 TSR1Q2NL82 804 aaKnown RBP18.16■□□□□ 0.5
CGREF1-206ENST00000405600 RALGAPA2Q2PPJ7 1873 aa18.16■□□□□ 0.5
CGREF1-206ENST00000405600 TIGD5Q53EQ6 642 aa18.16■□□□□ 0.5
CGREF1-206ENST00000405600 CMTR2Q8IYT2 770 aaKnown RBP18.16■□□□□ 0.5
CGREF1-206ENST00000405600 CACTINQ8WUQ7 758 aaKnown RBP18.16■□□□□ 0.5
CGREF1-206ENST00000405600 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
CGREF1-206ENST00000405600 CLIC2O15247 247 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 EFNA5P52803 228 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 MIIPQ5JXC2 388 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 CATSPER4Q7RTX7 472 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 MAP4K3Q8IVH8 894 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 TRIM59Q8IWR1 403 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 FAM186BQ8IYM0 893 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 RNF149Q8NC42 400 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 CLP1Q92989 425 aaKnown RBP18.15■□□□□ 0.5
CGREF1-206ENST00000405600 EEF2KMTQ96G04 330 aa18.15■□□□□ 0.5
CGREF1-206ENST00000405600 NSUN3Q9H649 340 aaKnown RBP18.15■□□□□ 0.5
CGREF1-206ENST00000405600 XIRP2A4UGR9 3374 aa18.14■□□□□ 0.5
CGREF1-206ENST00000405600 LRRIQ4A6NIV6 560 aa18.14■□□□□ 0.49
CGREF1-206ENST00000405600 C9IYK1 514 aa18.14■□□□□ 0.49
CGREF1-206ENST00000405600 C5orf67F2Z3F1 127 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms