RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 KCNN1Q92952 543 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 SYAP1Q96A49 352 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-204ENST00000405578 ZNF689Q96CS4 500 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-204ENST00000405578 GSDMAQ96QA5 445 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 ACCSQ96QU6 501 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 ADAM2Q99965 735 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 TCHPQ9BT92 498 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 NUP62CLQ9H1M0 184 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 TMEM206Q9H813 350 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 TBX20Q9UMR3 447 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 KMT2BQ9UMN6 2715 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-204ENST00000405578 CNTNAP2Q9UHC6 1331 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 EIF3DO15371 548 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPAIN-204ENST00000405578 DGKIO75912 1065 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 KRT37O76014 449 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 STAG3L1P0CL83 205 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 NMT1P30419 496 aaKnown RBP11.54□□□□□ -0.56
RPAIN-204ENST00000405578 LIG4P49917 911 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 CAMK4Q16566 473 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 KMT5BQ4FZB7 885 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
RPAIN-204ENST00000405578 ATF7IP2Q5U623 682 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 SLC27A1Q6PCB7 646 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 ZPBP2Q6X784 338 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 KREMEN2Q8NCW0 462 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 CLSTN2Q9H4D0 955 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 TLE6Q9H808 572 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 RGS18Q9NS28 235 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 UBE4BO95155 1302 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 TPRP12270 2363 aaKnown RBP11.54□□□□□ -0.56
RPAIN-204ENST00000405578 DMDP11532 3685 aa11.54□□□□□ -0.56
RPAIN-204ENST00000405578 A0A1B0GUA9 196 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 ENPP3O14638 875 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 PER2O15055 1255 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 CLDN3O15551 220 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 HOXA2O43364 376 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 TOM1L1O75674 476 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 RHOBTB3O94955 611 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 ARF4P18085 180 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 HOXA11P31270 313 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 STIM1Q13586 685 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 HSP90AA2PQ14568 343 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 AMHR2Q16671 573 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 SKOR2Q2VWA4 1001 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 DCAF4L1Q3SXM0 396 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 ZC2HC1CQ53FD0 456 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 L1TD1Q5T7N2 865 aaKnown RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 HS2ST1Q7LGA3 356 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 MAP4K3Q8IVH8 894 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 CMTR2Q8IYT2 770 aaKnown RBP11.53□□□□□ -0.56
RPAIN-204ENST00000405578 GOLGA5Q8TBA6 731 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 CPB2Q96IY4 423 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 TRAIPQ9BWF2 469 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 APOL5Q9BWW9 433 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 TMX1Q9H3N1 280 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 SLC39A2Q9NP94 309 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 TNFSF13BQ9Y275 285 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 PCDHB7Q9Y5E2 793 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
RPAIN-204ENST00000405578 A0A0U1RQF3 1178 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 B4GALT5O43286 388 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 KLRC4O43908 158 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 EOMESO95936 686 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 MYBP10242 640 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-204ENST00000405578 PPP1R2P41236 205 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 SNRPFP62306 86 aaKnown RBP11.52□□□□□ -0.57
RPAIN-204ENST00000405578 EHHADHQ08426 723 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 DSC3Q14574 896 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 KYAT1Q16773 422 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 DUSP6Q16828 381 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 ZNF568Q3ZCX4 644 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 SLFN12LQ6IEE8 588 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 MPZL3Q6UWV2 235 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 NPAS4Q8IUM7 802 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 TRIML1Q8N9V2 468 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 LINC01599Q8WXQ3 324 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 RSPH1Q8WYR4 309 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 HPS3Q969F9 1004 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 RMDN1Q96DB5 314 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 FIZ1Q96SL8 496 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 ACO2Q99798 780 aaKnown RBP11.52□□□□□ -0.57
RPAIN-204ENST00000405578 TARS2Q9BW92 718 aaKnown RBP11.52□□□□□ -0.57
RPAIN-204ENST00000405578 SMOC2Q9H3U7 446 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.57
RPAIN-204ENST00000405578 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 FAM105AQ9NUU6 356 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 TMEM161AQ9NX61 479 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 KIAA1468Q9P260 1216 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 CGNQ9P2M7 1197 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms