RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 ACSL3O95573 720 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 TRIP13Q15645 432 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-206ENST00000405546 UGCGQ16739 394 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 TMEM237Q96Q45 408 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 RIT2Q99578 217 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 GGA2Q9UJY4 613 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 GH1P01241 217 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 RARAP10276 462 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
ATG4B-206ENST00000405546 SPP2Q13103 211 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 EMC10Q5UCC4 262 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 NLRX1Q86UT6 975 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 HES6Q96HZ4 224 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 KMT5AQ9NQR1 393 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 FAM114A2Q9NRY5 505 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 NKX1-2Q9UD57 310 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-206ENST00000405546 GJA3Q9Y6H8 435 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 PLS3P13797 630 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 SLITRK6Q9H5Y7 841 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 RASAL2Q9UJF2 1139 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-206ENST00000405546 PMS2P54278 862 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 MAPK7Q13164 816 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 MTMR3Q13615 1198 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 SNRNP35Q16560 246 aaKnown RBP16.06■□□□□ 0.16
ATG4B-206ENST00000405546 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 MRRFQ96E11 262 aaKnown RBP16.06■□□□□ 0.16
ATG4B-206ENST00000405546 NUP85Q9BW27 656 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 ADAM7Q9H2U9 754 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 TMEM59LQ9UK28 342 aa16.06■□□□□ 0.16
ATG4B-206ENST00000405546 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 ANKRD63C9JTQ0 380 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 SMNDC1O75940 238 aaKnown RBP eCLIP16.05■□□□□ 0.163e-6■□□□□ 9.1
ATG4B-206ENST00000405546 ICAM1P05362 532 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 LINGO3P0C6S8 592 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 TNNI1P19237 187 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 SLC8A3P57103 927 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 DMP1Q13316 513 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-206ENST00000405546 MTMR2Q13614 643 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 RNF207Q6ZRF8 634 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
ATG4B-206ENST00000405546 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-206ENST00000405546 TMEM117Q9H0C3 514 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 A0A1B0GVG6 124 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 DPPA5A6NC42 116 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 FKBP1AP62942 108 aaKnown RBP16.05■□□□□ 0.16
ATG4B-206ENST00000405546 DCAF12L1Q5VU92 463 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 RHOT2Q8IXI1 618 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 DDX23Q9BUQ8 820 aaKnown RBP16.05■□□□□ 0.16
ATG4B-206ENST00000405546 INTUQ9ULD6 942 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 SLC12A4Q9UP95 1085 aa16.05■□□□□ 0.16
ATG4B-206ENST00000405546 A0A0A6YYK5 440 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 GNAT1P11488 350 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 CNGA1P29973 690 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 MRPS9P82933 396 aaKnown RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 BAATQ14032 418 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ZNF449Q6P9G9 518 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 JDP2Q8WYK2 163 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 DMAC2Q9NW81 257 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 PLSCR1O15162 318 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ZBED4O75132 1171 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ZNF131P52739 623 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 MFAP3P55082 362 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SLC15A2Q16348 729 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 CCDC137Q6PK04 289 aaKnown RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 NOP9Q86U38 636 aaKnown RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 JAMLQ86YT9 394 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 NEK9Q8TD19 979 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SYTL5Q8TDW5 730 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 C1orf54Q8WWF1 131 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 RMDN2Q96LZ7 410 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 FAM118BQ9BPY3 351 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 GPR88Q9GZN0 384 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ETNK1Q9HBU6 452 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 AGO4Q9HCK5 861 aaKnown RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 WNT10BO00744 389 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 PDE6CP51160 858 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 MXRA7P84157 204 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 CDCA2Q69YH5 1023 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SLFN11Q7Z7L1 901 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ZNF564Q8TBZ8 553 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 PCDHB18PQ96TA0 734 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SH3GL3Q99963 347 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
ATG4B-206ENST00000405546 SEPT9Q9UHD8 586 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-206ENST00000405546 MTUS1Q9ULD2 1270 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms