RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 EMSYQ7Z589 1322 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 THAP12O43422 761 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 MMP10P09238 476 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 GCLMP48507 274 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 SGO2Q562F6 1265 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 TPTE2Q6XPS3 522 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 C1orf186Q6ZWK4 172 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 PHLDB2Q86SQ0 1253 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 ZNF564Q8TBZ8 553 aaPredicted RBP16.58■□□□□ 0.25
ATG4B-205ENST00000404914 LRRC19Q9H756 370 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 LRRC42Q9Y546 428 aa16.58■□□□□ 0.25
ATG4B-205ENST00000404914 RGL2O15211 777 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 HIP1RO75146 1068 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 UFL1O94874 794 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 SERPINB2P05120 415 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 CALB2P22676 271 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 BFSP1Q12934 665 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 SLC47A2Q86VL8 602 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 VSIG1Q86XK7 387 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 DYDC2Q96IM9 177 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 WNT8AQ9H1J5 351 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 LRMDAQ9H2I8 198 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 WHRNQ9P202 907 aa16.58■□□□□ 0.24
ATG4B-205ENST00000404914 GAKO14976 1311 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 GGPS1O95749 300 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 GNPTABQ3T906 1256 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 LLGL2Q6P1M3 1020 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 ZNF720Q7Z2F6 126 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 C12orf50Q8NA57 414 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-205ENST00000404914 PLEKHO2Q8TD55 490 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 EPS8L1Q8TE68 723 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 TBC1D10AQ9BXI6 508 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 FOCADQ5VW36 1801 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 LIN7AO14910 233 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-205ENST00000404914 CYP26A1O43174 497 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 EXOC3O60645 756 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 WFS1O76024 890 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 FGFR1P11362 822 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 ICA1Q05084 483 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 TMED2Q15363 201 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 RNF217Q8TC41 542 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 STK32AQ8WU08 396 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 NOCTQ9UK39 431 aaKnown RBP16.57■□□□□ 0.24
ATG4B-205ENST00000404914 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
ATG4B-205ENST00000404914 EIF3DO15371 548 aaKnown RBP eCLIP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SLITRK3O94933 977 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 RRM1P23921 792 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 CLUL1Q15846 466 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 Q4G0T1 1027 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 C1orf220Q5T0J3 134 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 INTS8Q75QN2 995 aaKnown RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 LONP2Q86WA8 852 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 FBF1Q8TES7 1133 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 NUDCD1Q96RS6 583 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 NAP1L4Q99733 375 aaKnown RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 MKNK1Q9BUB5 465 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 EURLQ9NYK6 297 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 ADGRA3Q8IWK6 1321 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SKIV2L2P42285 1042 aaKnown RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 GRAPQ13588 217 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 HP1BP3Q5SSJ5 553 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 EGFL6Q8IUX8 553 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 NLGN1Q8N2Q7 840 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 GRAPLQ8TC17 118 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SPIRE2Q8WWL2 714 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 DENND2DQ9H6A0 471 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 PARVGQ9HBI0 331 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SERPINB13Q9UIV8 391 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 RWDD2BP57060 319 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 TBC1D10BQ4KMP7 808 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-205ENST00000404914 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 RFWD3Q6PCD5 774 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 PHC3Q8NDX5 983 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SLC5A5Q92911 643 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 ZNF653Q96CK0 615 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 SNF8Q96H20 258 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 KREMEN1Q96MU8 473 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 HSD17B14Q9BPX1 270 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 PHTF1Q9UMS5 762 aa16.56■□□□□ 0.24
ATG4B-205ENST00000404914 RASA4BC9J798 803 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 FSCN2O14926 492 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 RASA4O43374 803 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 GCAP28676 217 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 PCK1P35558 622 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 PTDSS1P48651 473 aaKnown RBP16.55■□□□□ 0.24
ATG4B-205ENST00000404914 FMO1Q01740 532 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 CCDC15Q0P6D6 951 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 MOGSQ13724 837 aa16.55■□□□□ 0.24
ATG4B-205ENST00000404914 C2CD6Q53TS8 623 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms