RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 DSC1Q08554 894 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 CAMK1Q14012 370 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 PTPROQ16827 1216 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 GLRA4Q5JXX5 417 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 SLFN12LQ6IEE8 588 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 KANK3Q6NY19 840 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 STXBP4Q6ZWJ1 553 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 TMEM173Q86WV6 379 aaPredicted RBP15.92■□□□□ 0.14
CDPF1-203ENST00000404583 ZNF507Q8TCN5 953 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 POMGNT1Q8WZA1 660 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 MRPL38Q96DV4 380 aaKnown RBP15.92■□□□□ 0.14
CDPF1-203ENST00000404583 TMEM175Q9BSA9 504 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 TMEM206Q9H813 350 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 TOPORSQ9NS56 1045 aaPredicted RBP15.92■□□□□ 0.14
CDPF1-203ENST00000404583 EXOC1Q9NV70 894 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 CACNG4Q9UBN1 327 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 FAN1Q9Y2M0 1017 aa15.92■□□□□ 0.14
CDPF1-203ENST00000404583 PDCD11Q14690 1871 aaKnown RBP15.91■□□□□ 0.14
CDPF1-203ENST00000404583 EIF3DO15371 548 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDPF1-203ENST00000404583 CXCL8P10145 99 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 PPM1AP35813 382 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 PLCB3Q01970 1234 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 KRT17Q04695 432 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 STK4Q13043 487 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 PNOCQ13519 176 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 POSTNQ15063 836 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 SLC10A6Q3KNW5 377 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 NELFCDQ8IXH7 590 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 BCL7CQ8WUZ0 217 aaPredicted RBP15.91■□□□□ 0.14
CDPF1-203ENST00000404583 SCFD1Q8WVM8 642 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 RABGGTAQ92696 567 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 IGSF21Q96ID5 467 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 SNX27Q96L92 541 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 LMAN2LQ9H0V9 348 aa15.91■□□□□ 0.14
CDPF1-203ENST00000404583 AGO2Q9UKV8 859 aaKnown RBP15.91■□□□□ 0.14
CDPF1-203ENST00000404583 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
CDPF1-203ENST00000404583 SMIM28A0A1B0GU29 152 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 CLTAP09496 248 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 ACOT2P49753 483 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 UBE2HP62256 183 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 PSMD2Q13200 908 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 TUSC3Q13454 348 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 NAB2Q15742 525 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 XKR4Q5GH76 650 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 KIAA0895Q8NCT3 520 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 TMEM169Q96HH4 297 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 TIGD1Q96MW7 591 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 ZMAT2Q96NC0 199 aaKnown RBP15.9■□□□□ 0.14
CDPF1-203ENST00000404583 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
CDPF1-203ENST00000404583 PAAF1Q9BRP4 392 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 PUF60Q9UHX1 559 aaKnown RBP15.9■□□□□ 0.14
CDPF1-203ENST00000404583 ANK1P16157 1881 aa15.9■□□□□ 0.14
CDPF1-203ENST00000404583 CASTOR2A6NHX0 329 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 F8W810 466 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 IRS1P35568 1242 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 ERVFC1P60507 584 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 UBE3AQ05086 875 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 ENOX2Q16206 610 aaKnown RBP15.89■□□□□ 0.13
CDPF1-203ENST00000404583 KYAT1Q16773 422 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 CLEC17AQ6ZS10 378 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 ZSWIM2Q8NEG5 633 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 ERCC4Q92889 916 aaPredicted RBP15.89■□□□□ 0.13
CDPF1-203ENST00000404583 CBWD1Q9BRT8 395 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 PCIF1Q9H4Z3 704 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 RPF1Q9H9Y2 349 aaKnown RBP15.89■□□□□ 0.13
CDPF1-203ENST00000404583 MARCH5Q9NX47 278 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 CNTN3Q9P232 1028 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 CPSF3Q9UKF6 684 aaKnown RBP15.89■□□□□ 0.13
CDPF1-203ENST00000404583 LZTS1Q9Y250 596 aa15.89■□□□□ 0.13
CDPF1-203ENST00000404583 TTC26A0AVF1 554 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 CARNS1A5YM72 827 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 LACTBL1A8MY62 500 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 TGFB1I1O43294 461 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 RHOBTB3O94955 611 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 GARTP22102 1010 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 SPAG1Q07617 926 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 ARMCX5Q6P1M9 558 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 CRELD2Q6UXH1 353 aaPredicted RBP15.88■□□□□ 0.13
CDPF1-203ENST00000404583 MICAL1Q8TDZ2 1067 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 CCDC47Q96A33 483 aaKnown RBP15.88■□□□□ 0.13
CDPF1-203ENST00000404583 FAM212AQ96EL1 285 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 SAAL1Q96ER3 474 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 PLEKHA5Q9HAU0 1116 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 GOLGA2P5Q9HBQ8 144 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 TLR9Q9NR96 1032 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 PCDHGC5Q9Y5F6 944 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 UBE4BO95155 1302 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 MUC3AQ02505 3323 aa15.88■□□□□ 0.13
CDPF1-203ENST00000404583 XIRP2A4UGR9 3374 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 GOLGA8IPA6NC78 632 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 GOLGA8JA6NMD2 632 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 KINO60870 393 aaKnown RBP15.87■□□□□ 0.13
CDPF1-203ENST00000404583 KCNE1P15382 129 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 PPP2R3AQ06190 1150 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
CDPF1-203ENST00000404583 KCNB1Q14721 858 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 BMT2Q1RMZ1 405 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 DDX53Q86TM3 631 aaKnown RBP15.87■□□□□ 0.13
CDPF1-203ENST00000404583 C18orf25Q96B23 403 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms