RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 GOLGA2P5Q9HBQ8 144 aa19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 TOPORSQ9NS56 1045 aaPredicted RBP19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 TBC1D7Q9P0N9 293 aa19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 ADAM28Q9UKQ2 775 aa19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 USP15Q9Y4E8 981 aaPredicted RBP19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 IRAK3Q9Y616 596 aa19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 MUC3AQ02505 3323 aa19.88■□□□□ 0.77
PTPRN2-204ENST00000404321 SMIM28A0A1B0GU29 152 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 FSD2A1L4K1 749 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 HNRNPDLO14979 420 aaKnown RBP19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 MEFVO15553 781 aaPredicted RBP19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 CUTAO60888 179 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 BRD1O95696 1058 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 CNPP09543 421 aaKnown RBP19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 IDEP14735 1019 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 IGFBP6P24592 240 aaPredicted RBP19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 KLRC2P26717 231 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 ME1P48163 572 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 GLUD2P49448 558 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 SMAD2Q15796 467 aaKnown RBP19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 KIAA1841Q6NSI8 718 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 SYCE2Q6PIF2 218 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 CASP10Q92851 521 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 DHX58Q96C10 678 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 SNX27Q96L92 541 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 KLHL5Q96PQ7 755 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 PPP1R10Q96QC0 940 aaKnown RBP19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 EMILIN2Q9BXX0 1053 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 ZDHHC9Q9Y397 364 aa19.87■□□□□ 0.77
PTPRN2-204ENST00000404321 EFEMP2O95967 443 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 SOX4Q06945 474 aaPredicted RBP19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 AXDND1Q5T1B0 1012 aaPredicted RBP19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 KANK3Q6NY19 840 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 TMEM184AQ6ZMB5 413 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 RNF168Q8IYW5 571 aaPredicted RBP19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 C12orf76Q8N812 135 aaPredicted RBP19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 KCNG4Q8TDN1 519 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 DNAJC19Q96DA6 116 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 ZMAT2Q96NC0 199 aaKnown RBP19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 IKZF4Q9H2S9 585 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 STK39Q9UEW8 545 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 CDH22Q9UJ99 828 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 PCDHA7Q9UN72 937 aa19.86■□□□□ 0.77
PTPRN2-204ENST00000404321 TISP43B9A030 160 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 LILRB3O75022 631 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 CXCL8P10145 99 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 MYBP10242 640 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 ZP2Q05996 745 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 MCL1Q07820 350 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 ZBTB41Q5SVQ8 909 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 KIAA0319Q5VV43 1072 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 ALKAL1Q6UXT8 129 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 GLYCTKQ8IVS8 523 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 GJD3Q8N144 294 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 SLC22A17Q8WUG5 538 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 RIN2Q8WYP3 895 aaPredicted RBP19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 CFAP45Q9UL16 551 aa19.85■□□□□ 0.77
PTPRN2-204ENST00000404321 SF3B1O75533 1304 aaKnown RBP eCLIP19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 ANKRD63C9JTQ0 380 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 TEX28O15482 410 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 WEE2P0C1S8 567 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 RPL17P18621 184 aaKnown RBP19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 TNFSF9P41273 254 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 CLCNKBP51801 687 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 GTF2BQ00403 316 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 SPAG1Q07617 926 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 USP41Q3LFD5 358 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 HERC4Q5GLZ8 1057 aaPredicted RBP19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 SLC39A4Q6P5W5 647 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 CEP57Q86XR8 500 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 KHSRPQ92945 711 aaKnown RBP eCLIP19.84■□□□□ 0.771e-7■■■■■ 32
PTPRN2-204ENST00000404321 C18orf25Q96B23 403 aaPredicted RBP19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 S1PR5Q9H228 398 aa19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 MRPL44Q9H9J2 332 aaKnown RBP19.84■□□□□ 0.77
PTPRN2-204ENST00000404321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 B3GAT3O94766 335 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 PIGRP01833 764 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 DSG1Q02413 1049 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 E2F4Q16254 413 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 SLC10A6Q3KNW5 377 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 XKR4Q5GH76 650 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 RTP2Q5QGT7 225 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 RARS2Q5T160 578 aaKnown RBP19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 FAM171A1Q5VUB5 890 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 ATL3Q6DD88 541 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 PRSS55Q6UWB4 352 aaPredicted RBP19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 ZNF720Q7Z2F6 126 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 MAP4K3Q8IVH8 894 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 ADHFE1Q8IWW8 467 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 TMEM130Q8N3G9 435 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 FEZF2Q8TBJ5 459 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 MSTO1Q9BUK6 570 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 CHST7Q9NS84 486 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 PANK4Q9NVE7 773 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 CNTN3Q9P232 1028 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 BDP1A6H8Y1 2624 aa19.83■□□□□ 0.77
PTPRN2-204ENST00000404321 SPDYE4A6NLX3 237 aa19.83■□□□□ 0.76
PTPRN2-204ENST00000404321 I3L4J1 428 aa19.83■□□□□ 0.76
PTPRN2-204ENST00000404321 GAP43P17677 238 aa19.83■□□□□ 0.76
PTPRN2-204ENST00000404321 CLCN4P51793 760 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms