RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 EZRP15311 586 aaKnown RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 PDE6BP35913 854 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 NEDD9Q14511 834 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 PIGWQ7Z7B1 504 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 FAM71AQ8IYT1 594 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 SPOCK2Q92563 424 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 WNT8AQ9H1J5 351 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 ECT2Q9H8V3 914 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 DENND3A2RUS2 1198 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 SRRM3A6NNA2 597 aaPredicted RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
RBM39-206ENST00000403542 SNX3O60493 162 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 RALAP11233 206 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 PLS3P13797 630 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 CNGA1P29973 690 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 GBP2P32456 591 aaPredicted RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 SLMAPQ14BN4 828 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 PREPLQ4J6C6 727 aaPredicted RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 BTNL9Q6UXG8 535 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 TAOK1Q7L7X3 1001 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 ARMC9Q7Z3E5 817 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 RMDN2Q96LZ7 410 aa12.8□□□□□ -0.36
RBM39-206ENST00000403542 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 RAVER2Q9HCJ3 691 aaKnown RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 MRPL11Q9Y3B7 192 aaKnown RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.8□□□□□ -0.36
RBM39-206ENST00000403542 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 P4HBP07237 508 aaKnown RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 MFAP3P55082 362 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 LACTB2Q53H82 288 aaPredicted RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 VSTM1Q6UX27 236 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 BICD1Q96G01 975 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 TMEM206Q9H813 350 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 KIF9Q9HAQ2 790 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 CENPFP49454 3210 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 ZSCAN5DPP0CG00 497 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 ELF1P32519 619 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 MTMR1Q13613 665 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 TMED2Q15363 201 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 C11orf70Q9BRQ4 267 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 STRA6Q9BX79 667 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 PARP2Q9UGN5 583 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 ASAP2O43150 1006 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 KRT10P13645 584 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 STX2P32856 288 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 ALDH5A1P51649 535 aaPredicted RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 MRPS9P82933 396 aaKnown RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 NAA25Q14CX7 972 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 SEZ6Q53EL9 994 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 SCARA3Q6AZY7 606 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 SV2AQ7L0J3 742 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 GLIS1Q8NBF1 620 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 HELQQ8TDG4 1101 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 CENPTQ96BT3 561 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 KLHL29Q96CT2 875 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 NT5C1BQ96P26 610 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 TGS1Q96RS0 853 aaKnown RBP12.79□□□□□ -0.36
RBM39-206ENST00000403542 HOMER3Q9NSC5 361 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 MCM8Q9UJA3 840 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 TMX2Q9Y320 296 aa12.79□□□□□ -0.36
RBM39-206ENST00000403542 POC1B-GALNT4F8VUJ3 575 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 GOLGA8MH3BSY2 632 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 HNRNPDLO14979 420 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 ETS1P14921 441 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 ATF2P15336 505 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 CLNS1AP54105 237 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 CDR2Q01850 454 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 KRT39Q6A163 491 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 CYFIP1Q7L576 1253 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 SLC9A9Q8IVB4 645 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 FITM2Q8N6M3 262 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 SLC17A8Q8NDX2 589 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 AGAP11Q8TF27 550 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 CHURC1Q8WUH1 139 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 SHC3Q92529 594 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 RAB20Q9NX57 234 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms