RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 PQBP1O60828 265 aaKnown RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 DTNBO60941 627 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 ITGA10O75578 1167 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 ZBED1O96006 694 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 RPLP2P05387 115 aaKnown RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 SLC5A1P13866 664 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PHKG2P15735 406 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 HOXA5P20719 270 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 CASRP41180 1078 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 MAP2K6P52564 334 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 SAFB2Q14151 953 aaKnown RBP eCLIP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 GRM7Q14831 915 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 MST1LQ2TV78 715 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PPP4R3AQ6IN85 833 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 SWSAP1Q6NVH7 229 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 FAM111BQ6SJ93 734 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 Q6ZVL8 140 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PDZD4Q76G19 769 aaPredicted RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 ADGRE4PQ86SQ3 457 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 CIR1Q86X95 450 aaPredicted RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 SMC5Q8IY18 1101 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 GPR135Q8IZ08 494 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 KIAA0319LQ8IZA0 1049 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 FAM43AQ8N2R8 423 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PQLC1Q8N2U9 271 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 OR7D4Q8NG98 312 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PLBD2Q8NHP8 589 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 ARL8AQ96BM9 186 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 CYFIP2Q96F07 1278 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 NT5C1BQ96P26 610 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 GNRHR2Q96P88 292 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 DMRTA2Q96SC8 542 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 STRBPQ96SI9 672 aaKnown RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PLA2G12BQ9BX93 195 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PCGF6Q9BYE7 350 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 TMEM60Q9H2L4 133 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 MANSC1Q9H8J5 431 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 FAM204AQ9H8W3 233 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 ARMT1Q9H993 441 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 AGO3Q9H9G7 860 aaKnown RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 RTEL1Q9NZ71 1219 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 FNIP2Q9P278 1114 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 TRPS1Q9UHF7 1281 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 TAGLN3Q9UI15 199 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 PHTF1Q9UMS5 762 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 ZFR2Q9UPR6 939 aaKnown RBP3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 SIK3Q9Y2K2 1263 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 NR2E3Q9Y5X4 410 aa3.07□□□□□ -1.92
CBX3P9-201ENST00000402326 FTLP02792 175 aaPredicted RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SYN1P17600 705 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 PTPN7P35236 360 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SREBF1P36956 1147 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SLC6A9P48067 706 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 GZMKP49863 264 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 APBA1Q02410 837 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 TARDBPQ13148 414 aaKnown RBP eCLIP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 DUSP8Q13202 625 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 MRPL49Q13405 166 aaKnown RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 NFIXQ14938 502 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 CNN3Q15417 329 aaKnown RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 ANO6Q4KMQ2 910 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 CCDC157Q569K6 752 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 RNF220Q5VTB9 566 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 ERICH6BQ5W0A0 696 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 TTLL10Q6ZVT0 673 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 LIMS2Q7Z4I7 341 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SRGAP1Q7Z6B7 1085 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 MORC1Q86VD1 984 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 DRC7Q8IY82 874 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SPICE1Q8N0Z3 855 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SH2D3CQ8N5H7 860 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 LILRA3Q8N6C8 439 aaPredicted RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 FBXO18Q8NFZ0 1043 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 KLHDC4Q8TBB5 520 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 CCHCR1Q8TD31 782 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 STON2Q8WXE9 905 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 HOXB13Q92826 284 aaPredicted RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 RGMAQ96B86 450 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 IL17RAQ96F46 866 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 CLPTM1LQ96KA5 538 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 OR14A2Q96R54 314 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 TBCBQ99426 244 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 VRK1Q99986 396 aaPredicted RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 ELAC2Q9BQ52 826 aaKnown RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 SENP6Q9GZR1 1112 aaPredicted RBP3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 ENKD1Q9H0I2 346 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 EPC1Q9H2F5 836 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 LDAHQ9H6V9 325 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 LANCL2Q9NS86 450 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 TDP1Q9NUW8 608 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 TMEM140Q9NV12 185 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 PLA2G3Q9NZ20 509 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 STAP2Q9UGK3 403 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 L1RE1Q9UN81 338 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 POLHQ9Y253 713 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 PCDHA3Q9Y5H8 950 aa3.06□□□□□ -1.92
CBX3P9-201ENST00000402326 A0A0G2JLL6 359 aaPredicted RBP3.05□□□□□ -1.92
CBX3P9-201ENST00000402326 CFAP69A5D8W1 941 aa3.05□□□□□ -1.92
CBX3P9-201ENST00000402326 FAM227AF5H4B4 570 aa3.05□□□□□ -1.92
CBX3P9-201ENST00000402326 WNT10BO00744 389 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms