RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 PCDHB18PQ96TA0 734 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
ATG3-202ENST00000402314 CTTNBP2NLQ9P2B4 639 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 PAEPP09466 180 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 PPATQ06203 517 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 TAF11Q15544 211 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 XKR9Q5GH70 373 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 HOOK3Q86VS8 718 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 C1orf131Q8NDD1 294 aaKnown RBP15.1■□□□□ 0.01
ATG3-202ENST00000402314 RIT2Q99578 217 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 AGPAT1Q99943 283 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 SPATS2LQ9NUQ6 558 aaKnown RBP15.1■□□□□ 0.01
ATG3-202ENST00000402314 RIPK3Q9Y572 518 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
ATG3-202ENST00000402314 CYP26A1O43174 497 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 MAP3K13O43283 966 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ASNSP08243 561 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 GHRP10912 638 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ABL2P42684 1182 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 QARSP47897 775 aaKnown RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 PIGWQ7Z7B1 504 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 MAGEC3Q8TD91 643 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 DHX38Q92620 1227 aaKnown RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 SEMA4DQ92854 862 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 TMEM237Q96Q45 408 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 CNOT10Q9H9A5 744 aaKnown RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 TMEM253P0C7T8 217 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 VPS41P49754 854 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 MTMR2Q13614 643 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 MESDQ14696 234 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ANKRD20A2Q5SQ80 823 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ANKRD20A1Q5TYW2 823 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ANKRD20A3Q5VUR7 823 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 SLC47A2Q86VL8 602 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 RMDN2Q96LZ7 410 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 TMEM117Q9H0C3 514 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 FAM114A2Q9NRY5 505 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 NKX1-2Q9UD57 310 aaPredicted RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 ALG6Q9Y672 507 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ADSSP30520 456 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ERFP50548 548 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 SESN3P58005 492 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 GRIK3Q13003 919 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 TRIP13Q15645 432 aaPredicted RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 C2CD6Q53TS8 623 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ARMC9Q7Z3E5 817 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 EGFL6Q8IUX8 553 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 PWWP2AQ96N64 755 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 PABPC3Q9H361 631 aaKnown RBP15.09■□□□□ 0.01
ATG3-202ENST00000402314 PGAP2Q9UHJ9 254 aa15.09■□□□□ 0.01
ATG3-202ENST00000402314 PLS3P13797 630 aa15.08■□□□□ 0
ATG3-202ENST00000402314 TRAF1Q13077 416 aa15.08■□□□□ 0
ATG3-202ENST00000402314 NOP9Q86U38 636 aaKnown RBP15.08■□□□□ 0
ATG3-202ENST00000402314 JAMLQ86YT9 394 aa15.08■□□□□ 0
ATG3-202ENST00000402314 FITM2Q8N6M3 262 aa15.08■□□□□ 0
ATG3-202ENST00000402314 KREMEN1Q96MU8 473 aa15.08■□□□□ 0
ATG3-202ENST00000402314 RMDN3Q96TC7 470 aa15.08■□□□□ 0
ATG3-202ENST00000402314 ERP44Q9BS26 406 aa15.08■□□□□ 0
ATG3-202ENST00000402314 A0A0A6YYK5 440 aaPredicted RBP15.08■□□□□ 0
ATG3-202ENST00000402314 TCRBV7S2A1N4TA0A589 114 aa15.08■□□□□ 0
ATG3-202ENST00000402314 RASGRF2O14827 1237 aa15.08■□□□□ 0
ATG3-202ENST00000402314 SNX3O60493 162 aa15.08■□□□□ 0
ATG3-202ENST00000402314 PPFIA2O75334 1257 aa15.08■□□□□ 0
ATG3-202ENST00000402314 KCNA3P22001 575 aa15.08■□□□□ 0
ATG3-202ENST00000402314 MMP13P45452 471 aa15.08■□□□□ 0
ATG3-202ENST00000402314 RPL21P46778 160 aaKnown RBP15.08■□□□□ 0
ATG3-202ENST00000402314 SLC8A3P57103 927 aa15.08■□□□□ 0
ATG3-202ENST00000402314 LMBRD2Q68DH5 695 aaPredicted RBP15.08■□□□□ 0
ATG3-202ENST00000402314 MIS18BP1Q6P0N0 1132 aa15.08■□□□□ 0
ATG3-202ENST00000402314 ZDHHC14Q8IZN3 488 aa15.08■□□□□ 0
ATG3-202ENST00000402314 SYCE1Q8N0S2 351 aa15.08■□□□□ 0
ATG3-202ENST00000402314 RASGEF1CQ8N431 466 aa15.08■□□□□ 0
ATG3-202ENST00000402314 XXYLT1Q8NBI6 393 aa15.08■□□□□ 0
ATG3-202ENST00000402314 BSNDQ8WZ55 320 aa15.08■□□□□ 0
ATG3-202ENST00000402314 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
ATG3-202ENST00000402314 OSBPL1AQ9BXW6 950 aa15.08■□□□□ 0
ATG3-202ENST00000402314 PIDD1Q9HB75 910 aa15.08■□□□□ 0
ATG3-202ENST00000402314 CCDC188H7C350 402 aa15.07■□□□□ 0
ATG3-202ENST00000402314 MXI1P50539 228 aa15.07■□□□□ 0
ATG3-202ENST00000402314 NFIL3Q16649 462 aa15.07■□□□□ 0
ATG3-202ENST00000402314 SAMD7Q7Z3H4 446 aa15.07■□□□□ 0
ATG3-202ENST00000402314 MAB21L3Q8N8X9 362 aa15.07■□□□□ 0
ATG3-202ENST00000402314 C3orf20Q8ND61 904 aa15.07■□□□□ 0
ATG3-202ENST00000402314 MRRFQ96E11 262 aaKnown RBP15.07■□□□□ 0
ATG3-202ENST00000402314 ACCSQ96QU6 501 aa15.07■□□□□ 0
ATG3-202ENST00000402314 ETNK1Q9HBU6 452 aa15.07■□□□□ 0
ATG3-202ENST00000402314 ADAM22Q9P0K1 906 aa15.07■□□□□ 0
ATG3-202ENST00000402314 UBIAD1Q9Y5Z9 338 aa15.07■□□□□ 0
ATG3-202ENST00000402314 SRRM3A6NNA2 597 aaPredicted RBP15.07■□□□□ 0
ATG3-202ENST00000402314 MSH2P43246 934 aa15.07■□□□□ 0
ATG3-202ENST00000402314 TUBP50607 506 aa15.07■□□□□ 0
ATG3-202ENST00000402314 IRX1P78414 480 aaPredicted RBP15.07■□□□□ 0
ATG3-202ENST00000402314 PGM5Q15124 567 aa15.07■□□□□ 0
ATG3-202ENST00000402314 FAM43BQ6ZT52 329 aaPredicted RBP15.07■□□□□ 0
ATG3-202ENST00000402314 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
ATG3-202ENST00000402314 NIM1KQ8IY84 436 aa15.07■□□□□ 0
ATG3-202ENST00000402314 ATG4CQ96DT6 458 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms