RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 TAOK3Q9H2K8 898 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 KIF9Q9HAQ2 790 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 DIS3Q9Y2L1 958 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 IGF2BP3O00425 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 SNX3O60493 162 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 YWHABP31946 246 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 WNT8AQ9H1J5 351 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
PPP4R1-203ENST00000400556 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SRRM3A6NNA2 597 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 EZRP15311 586 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ELF1P32519 619 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 LACTB2Q53H82 288 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 FAM71AQ8IYT1 594 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 RAVER2Q9HCJ3 691 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ZSCAN5DPP0CG00 497 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 TMED2Q15363 201 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 STRIP1Q5VSL9 837 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ARMC9Q7Z3E5 817 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 MCM8Q9UJA3 840 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SLC26A4O43511 780 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 RALAP11233 206 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 KRT10P13645 584 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 CNGA1P29973 690 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SLMAPQ14BN4 828 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 NAA25Q14CX7 972 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SEZ6Q53EL9 994 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 TAOK1Q7L7X3 1001 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ANKS1BQ7Z6G8 1248 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 AGAP11Q8TF27 550 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 FAM213AQ9BRX8 229 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 UPP2O95045 317 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 PLS3P13797 630 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ETS1P14921 441 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 STX2P32856 288 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 CLNS1AP54105 237 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 GSTA5Q7RTV2 222 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 SLC17A8Q8NDX2 589 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 BSNDQ8WZ55 320 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 STRA6Q9BX79 667 aa11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-203ENST00000400556 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 POC1B-GALNT4F8VUJ3 575 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 KRT16P08779 473 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 TCF4P15884 667 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 MFAP3P55082 362 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 NCALDP61601 193 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 FITM2Q8N6M3 262 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 CENPTQ96BT3 561 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 BICD1Q96G01 975 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 C10orf88Q9H8K7 445 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 GREB1LQ9C091 1923 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 ASAP2O43150 1006 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 MGRN1O60291 552 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 BANF1O75531 89 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 DNAJC8O75937 253 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 HARSP12081 509 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 ATF2P15336 505 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 QARSP47897 775 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 MRPS9P82933 396 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 MTMR1Q13613 665 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 PARD3BQ8TEW8 1205 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 SHC3Q92529 594 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
PPP4R1-203ENST00000400556 PARP2Q9UGN5 583 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms