RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 GPR65Q8IYL9 337 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 PJA1Q8NG27 643 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 ITFG1Q8TB96 612 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 WASF1Q92558 559 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 FZD8Q9H461 694 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 SLC2A4RGQ9NR83 387 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 PRMT7Q9NVM4 692 aaPredicted RBP13.19□□□□□ -0.3
LINC00544-201ENST00000400540 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 OTOGLQ3ZCN5 2332 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 SP9P0CG40 484 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 LIG1P18858 919 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 LIN9Q5TKA1 542 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 CATSPER3Q86XQ3 398 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 KIAA2013Q8IYS2 634 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
LINC00544-201ENST00000400540 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 GTF3C6Q969F1 213 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 KIFC3Q9BVG8 833 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 HCFC1R1Q9NWW0 138 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 POLIQ9UNA4 740 aa13.18□□□□□ -0.3
LINC00544-201ENST00000400540 ANK1P16157 1881 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 N4BP3O15049 544 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 PRKCBP05771 671 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 THP07101 528 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
LINC00544-201ENST00000400540 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
LINC00544-201ENST00000400540 FAM187BQ17R55 369 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 TMEM132AQ24JP5 1023 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 RSPO2Q6UXX9 243 aaPredicted RBP13.17□□□□□ -0.3
LINC00544-201ENST00000400540 ERMP1Q7Z2K6 904 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 C1orf210Q8IVY1 113 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
LINC00544-201ENST00000400540 MCPH1Q8NEM0 835 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 SLC7A14Q8TBB6 771 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 FGF13Q92913 245 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 RMDN1Q96DB5 314 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 KXD1Q9BQD3 176 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 POLD4Q9HCU8 107 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 CDH7Q9ULB5 785 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
LINC00544-201ENST00000400540 MTF2Q9Y483 593 aaPredicted RBP13.17□□□□□ -0.3
LINC00544-201ENST00000400540 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00544-201ENST00000400540 XRCC6P12956 609 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00544-201ENST00000400540 MCM7P33993 719 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 STARD6P59095 220 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 ST3GAL1Q11201 340 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
LINC00544-201ENST00000400540 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 ING5Q8WYH8 240 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
LINC00544-201ENST00000400540 ZFP37Q9Y6Q3 630 aaPredicted RBP13.16□□□□□ -0.3
LINC00544-201ENST00000400540 I3L4J1 428 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 CD72P21854 359 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 HOXA9P31269 272 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 OR1D2P34982 312 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 CLCNKBP51801 687 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 GUCY1B3Q02153 619 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
LINC00544-201ENST00000400540 MAPK6Q16659 721 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 POTEHQ6S545 545 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 PADI6Q6TGC4 694 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 CD300LGQ6UXG3 332 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
LINC00544-201ENST00000400540 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 HINFPQ9BQA5 517 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 C2orf40Q9H1Z8 148 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 SEMA4AQ9H3S1 761 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
LINC00544-201ENST00000400540 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
LINC00544-201ENST00000400540 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 CEP250Q9BV73 2442 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 KANSL1LA0AUZ9 987 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 MED19A0JLT2 244 aaPredicted RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 ACKR2O00590 384 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 XYLBO75191 536 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 FGFR3P22607 806 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 TKTP29401 623 aaKnown RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 BRCC3P46736 316 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 RAB33AQ14088 237 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 ECM1Q16610 540 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 NT5DC1Q5TFE4 455 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 ZC3H14Q6PJT7 736 aaKnown RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 MTSS1LQ765P7 747 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 PPP1R10Q96QC0 940 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms