RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 CATSPERBQ9H7T0 1116 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 CHRNA3P32297 505 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 RGS7P49802 495 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 SLC9A5Q14940 896 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 ATF7IP2Q5U623 682 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 SKA1Q96BD8 255 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 CDH6P55285 790 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 WDR72Q3MJ13 1102 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 BHMTQ93088 406 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 ANLNQ9NQW6 1124 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 CEP72Q9P209 647 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 ZC3H11AO75152 810 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 CKBP12277 381 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 EPHB3P54753 998 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 CEP55Q53EZ4 464 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 TTC17Q96AE7 1141 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 ZFYVE19Q96K21 471 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 TSEN34Q9BSV6 310 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 BFARQ9NZS9 450 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 NFU1Q9UMS0 254 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 MANSC4A6NHS7 340 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 EPB42P16452 691 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 VCLP18206 1134 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 BARGINQ6ZT62 677 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 ENGASEQ8NFI3 743 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 L3MBTL3Q96JM7 780 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 EVA1BQ9NVM1 165 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 FLT1P17948 1338 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CFAP99D6REC4 459 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 NDUFS3O75489 264 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 DGAT1O75907 488 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 PYGBP11216 843 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CCT5P48643 541 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 FASTKD1Q53R41 847 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 HHIPL2Q6UWX4 724 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 VCPKMTQ9H867 229 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 NAGPAQ9UK23 515 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 TMPRSS15P98073 1019 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 PTPN21Q16825 1174 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 GPR63Q9BZJ6 419 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CLCN1P35523 988 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 PTPAQ15257 358 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 KCTD16Q68DU8 428 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 TBC1D1Q86TI0 1168 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CHSY1Q86X52 802 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 OPTNQ96CV9 577 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CAPN10Q9HC96 672 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 TRAF3IP3Q9Y228 551 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 KRT87PA6NCN2 255 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 EEF2KO00418 725 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 FSCBQ5H9T9 825 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 LRRC71Q8N4P6 559 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 LINC00301Q8NCQ3 95 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CCDC197Q8NCU1 140 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 ZKSCAN4Q969J2 545 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 PRKCEQ02156 737 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 THEGQ9P2T0 379 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 CAPN11Q9UMQ6 739 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 TRIM33Q9UPN9 1127 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
CACNA1C-213ENST00000399629 TRPA1O75762 1119 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 ACSL3O95573 720 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 NR3C2P08235 984 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 ETFBP38117 255 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 SLC11A2P49281 568 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 EPHB4P54760 987 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 ZNF445P59923 1031 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 PKP3Q9Y446 797 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 AP3B1O00203 1094 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 AARSP49588 968 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 EFTUD2Q15029 972 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 PCSK7Q16549 785 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 ATP6V0D2Q8N8Y2 350 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 CINPQ9BW66 212 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 AKAP7Q9P0M2 348 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 EMSYQ7Z589 1322 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 DYRK3O43781 588 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 KLRC2P26717 231 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 KCNH2Q12809 1159 aa12.73□□□□□ -0.37
CACNA1C-213ENST00000399629 KLHL38Q2WGJ6 581 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms