RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 DDHD2O94830 711 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KIF20AO95235 890 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 POMCP01189 267 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CCNE1P24864 410 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DNAJB2P25686 324 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CASP4P49662 377 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CYP2J2P51589 502 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NOMO2Q5JPE7 1267 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KLHL10Q6JEL2 608 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GLB1LQ6UWU2 654 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 HS2ST1Q7LGA3 356 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ZNF280BQ86YH2 543 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 P2RX5Q93086 422 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FAM84AQ96KN4 292 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PPP1R10Q96QC0 940 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FUCA2Q9BTY2 467 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NKX2-4Q9H2Z4 354 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 UBN1Q9NPG3 1134 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CGNQ9P2M7 1197 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CTNND2Q9UQB3 1225 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LACTBL1A8MY62 500 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KCNE1P15382 129 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TAP1Q03518 808 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DSC1Q08554 894 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C11orf57Q6ZUT1 292 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 HACE1Q8IYU2 909 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GPD1LQ8N335 351 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 XXYLT1Q8NBI6 393 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GOLGA5Q8TBA6 731 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DHTKD1Q96HY7 919 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LRCH3Q96II8 777 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NRDE2Q9H7Z3 1164 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CACNG4Q9UBN1 327 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DNAJB4Q9UDY4 337 aa13.51□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PTPRJQ12913 1337 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PSMA7O14818 248 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KIAA0391O15091 583 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 AKAP3O75969 853 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NR2F2P24468 414 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PBX3P40426 434 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PPP1R2P41236 205 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 STX17P56962 302 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 POU5F1Q01860 360 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SPAG1Q07617 926 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RAB30Q15771 203 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KYAT1Q16773 422 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 HABP4Q5JVS0 413 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SCARA3Q6AZY7 606 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FOXR2Q6PJQ5 311 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EFCAB13Q8IY85 973 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MLKLQ8NB16 471 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C17orf80Q9BSJ5 609 aa13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LDHAP00338 332 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NFICP08651 508 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SLC11A1P49279 550 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 YARSP54577 528 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LRRC63Q05C16 580 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TYRO3Q06418 890 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CYP24A1Q07973 514 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GRIK3Q13003 919 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PAK1Q13153 545 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 STIM1Q13586 685 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SNRNP35Q16560 246 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 JADE1Q6IE81 842 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FIBCD1Q8N539 461 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 URGCPQ8TCY9 931 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 BCL7CQ8WUZ0 217 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RSPH1Q8WYR4 309 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TIFAQ96CG3 184 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RPS6KC1Q96S38 1066 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms