RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 CLMNQ96JQ2 1002 aa12.44□□□□□ -0.42
TMF1-201ENST00000398559 RANBP17Q9H2T7 1088 aaKnown RBP12.44□□□□□ -0.42
TMF1-201ENST00000398559 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
TMF1-201ENST00000398559 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
TMF1-201ENST00000398559 ENO3P13929 434 aaPredicted RBP12.44□□□□□ -0.42
TMF1-201ENST00000398559 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
TMF1-201ENST00000398559 BLVRAP53004 296 aa12.44□□□□□ -0.42
TMF1-201ENST00000398559 SESN2P58004 480 aaPredicted RBP12.44□□□□□ -0.42
TMF1-201ENST00000398559 SLC18A3Q16572 532 aa12.44□□□□□ -0.42
TMF1-201ENST00000398559 MARCOQ9UEW3 520 aaPredicted RBP12.44□□□□□ -0.42
TMF1-201ENST00000398559 POLIQ9UNA4 740 aa12.44□□□□□ -0.42
TMF1-201ENST00000398559 AKAP10O43572 662 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 DNAL1Q4LDG9 190 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 KDELC2Q7Z4H8 507 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 RCOR2Q8IZ40 523 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 NUP93Q8N1F7 819 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 PAWRQ96IZ0 340 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 EPAS1Q99814 870 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 SIK2Q9H0K1 926 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 MAD2L2Q9UI95 211 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 CDV3Q9UKY7 258 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 ZNF335Q9H4Z2 1342 aaPredicted RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 VCAM1P19320 739 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 ATXN3P54252 364 aaPredicted RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 SEMA3FQ13275 785 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 DMC1Q14565 340 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 AGBL2Q5U5Z8 902 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 PATL1Q86TB9 770 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 GFM2Q969S9 779 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 TRIM45Q9H8W5 580 aaPredicted RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 RBM12Q9NTZ6 932 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 NLRP1Q9C000 1473 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 FBXW4P57775 412 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 SNRNP48Q6IEG0 339 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 TRPM8Q7Z2W7 1104 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 CYGBQ8WWM9 190 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 OTULINQ96BN8 352 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 AGPAT5Q9NUQ2 364 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 LSP1P33241 339 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 MRPL28Q13084 256 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 DCAF4L1Q3SXM0 396 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 CPA5Q8WXQ8 436 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 AIPL1Q9NZN9 384 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 XPO7Q9UIA9 1087 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 ITIH6Q6UXX5 1313 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 NMT1P30419 496 aaKnown RBP12.43□□□□□ -0.42
TMF1-201ENST00000398559 STX3Q13277 289 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 KIF2BQ8N4N8 673 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.428e-6■□□□□ 11.1
TMF1-201ENST00000398559 THTPAQ9BU02 230 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 ITM2BQ9Y287 266 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 LAMC1P11047 1609 aa12.43□□□□□ -0.42
TMF1-201ENST00000398559 A8MXQ7 604 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 SRGNP10124 158 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PSMC5P62195 406 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 OLFML2BQ68BL8 750 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PPHLN1Q8NEY8 458 aaKnown RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 B4GALNT2Q8NHY0 566 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PSMC3IPQ9P2W1 217 aaPredicted RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 GSG1L2A8MUP6 293 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 UBE3AQ05086 875 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 QRICH1Q2TAL8 776 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ANKRD7Q92527 254 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ERP27Q96DN0 273 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 FOXP2O15409 715 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 KRT72Q14CN4 511 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 BATF3Q9NR55 127 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 CPDO75976 1380 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ERBB3P21860 1342 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 FAM95CA0A1B0GW59 222 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PRPF4O43172 522 aaKnown RBP eCLIP12.42□□□□□ -0.42
TMF1-201ENST00000398559 ITIH2P19823 946 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 CCND1P24385 295 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ACTR2P61160 394 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 NR1I3Q14994 352 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ALX1Q15699 326 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PLD3Q8IV08 490 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 ZFYVE19Q96K21 471 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 CXorf56Q9H5V9 222 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 RAD51CO43502 376 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 GFAPP14136 432 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 GALCP54803 685 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 DPYDQ12882 1025 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 MTHFD1LQ6UB35 978 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms