RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
TFF3-202ENST00000398431 CEP57Q86XR8 500 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 POLR3CQ9BUI4 534 aaPredicted RBP13.3□□□□□ -0.28
TFF3-202ENST00000398431 ARHGEF3Q9NR81 526 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 CDH7Q9ULB5 785 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 ZFP37Q9Y6Q3 630 aaPredicted RBP13.3□□□□□ -0.28
TFF3-202ENST00000398431 R4GN57 208 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 TRIP11Q15643 1979 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
TFF3-202ENST00000398431 FANCMQ8IYD8 2048 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 COL4A3Q01955 1670 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 ACKR2O00590 384 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 N4BP3O15049 544 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 C8AP07357 584 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 HNRNPA1P09651 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
TFF3-202ENST00000398431 FGFR3P22607 806 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 MCM7P33993 719 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 ID4P47928 161 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 PRPF4BQ13523 1007 aaKnown RBP13.29□□□□□ -0.28
TFF3-202ENST00000398431 RAB33AQ14088 237 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 ECM1Q16610 540 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 NT5DC1Q5TFE4 455 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 PADI6Q6TGC4 694 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 ZBTB8OSQ8IWT0 167 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
TFF3-202ENST00000398431 ITFG1Q8TB96 612 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 FGF13Q92913 245 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
TFF3-202ENST00000398431 FOXQ1Q9C009 403 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
TFF3-202ENST00000398431 ZNF292O60281 2723 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 CCL16O15467 120 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 LMNAP02545 664 aaKnown RBP13.28□□□□□ -0.28
TFF3-202ENST00000398431 PRKCBP05771 671 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 SP9P0CG40 484 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 RPA1P27694 616 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 HOXA9P31269 272 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 OR1D2P34982 312 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 MAPK6Q16659 721 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 PPM1LQ5SGD2 360 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 C1orf210Q8IVY1 113 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
TFF3-202ENST00000398431 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 DDX23Q9BUQ8 820 aaKnown RBP13.28□□□□□ -0.28
TFF3-202ENST00000398431 C2orf40Q9H1Z8 148 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 HCFC1R1Q9NWW0 138 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 DNMT3BQ9UBC3 853 aaKnown RBP13.28□□□□□ -0.28
TFF3-202ENST00000398431 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 MTF2Q9Y483 593 aaPredicted RBP13.28□□□□□ -0.28
TFF3-202ENST00000398431 DCHS1Q96JQ0 3298 aa13.28□□□□□ -0.28
TFF3-202ENST00000398431 TMEM189-UBE2V1I3L0A0 370 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 POU2F2P09086 479 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 NAMPTP43490 491 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 GUCY1B3Q02153 619 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 ELAVL2Q12926 359 aaKnown RBP13.27□□□□□ -0.29
TFF3-202ENST00000398431 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.29
TFF3-202ENST00000398431 ZNF174Q15697 407 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 UVSSAQ2YD98 709 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 SLC44A4Q53GD3 710 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 AXDND1Q5T1B0 1012 aaPredicted RBP13.27□□□□□ -0.29
TFF3-202ENST00000398431 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
TFF3-202ENST00000398431 ERMP1Q7Z2K6 904 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 C4orf32Q8N8J7 132 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 PJA1Q8NG27 643 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 KIFC3Q9BVG8 833 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 MTRRQ9UBK8 725 aa13.27□□□□□ -0.29
TFF3-202ENST00000398431 LIG1P18858 919 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 RFX1P22670 979 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 RBM25P49756 843 aaKnown RBP13.26□□□□□ -0.29
TFF3-202ENST00000398431 CLCNKBP51801 687 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 NEK4P51957 841 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 UPP1Q16831 310 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 OTOGLQ3ZCN5 2332 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 GLRA4Q5JXX5 417 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 LIN9Q5TKA1 542 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 ALKAL1Q6UXT8 129 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 WDR87Q6ZQQ6 2873 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 C3orf58Q8NDZ4 430 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 DEPTORQ8TB45 409 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 SLC7A14Q8TBB6 771 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 ADPGKQ9BRR6 497 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 PLA2G2FQ9BZM2 168 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 POLIQ9UNA4 740 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 BACE2Q9Y5Z0 518 aa13.26□□□□□ -0.29
TFF3-202ENST00000398431 SMIM28A0A1B0GU29 152 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 ARHGEF35A5YM69 484 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 SHISA7A6NL88 538 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 I3L4J1 428 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 TBC1D4O60343 1298 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 B3GAT3O94766 335 aa13.25□□□□□ -0.29
TFF3-202ENST00000398431 OR52Z1P0C646 297 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms