RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RPS6KC1Q96S38 1066 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CYP39A1Q9NYL5 469 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 NDUFAB1O14561 156 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MAFGO15525 162 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DGAT1O75907 488 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 C1orf131Q8NDD1 294 aaKnown RBP19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CD101Q93033 1021 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 POLR3FQ9H1D9 316 aaPredicted RBP19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PDLIM7Q9NR12 457 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 RLFQ13129 1914 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 EBAG9O00559 213 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PHF2O75151 1096 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MCCD1P59942 119 aaPredicted RBP19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TGFB2P61812 414 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DCAF15Q66K64 600 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PHLDB2Q86SQ0 1253 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ZNF516Q92618 1163 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 C17orf75Q9HAS0 396 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 AS3MTQ9HBK9 375 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ZDHHC18Q9NUE0 388 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DCDC2CA8MYV0 355 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MTA2O94776 668 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CYP1A2P05177 515 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MDH1P40925 334 aaKnown RBP19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SEC24CP53992 1094 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 WNT7BP56706 349 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SP2Q02086 613 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PPP2R5EQ16537 467 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SEL1L2Q5TEA6 688 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 EMC10Q5UCC4 262 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ANGEL2Q5VTE6 544 aaKnown RBP19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FBXO25Q8TCJ0 367 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ZNF526Q8TF50 670 aaPredicted RBP19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GTF3C4Q9UKN8 822 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PTGIRP43119 386 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DHX34Q14147 1143 aaKnown RBP19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 C2CD6Q53TS8 623 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 BRDTQ58F21 947 aaPredicted RBP19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MCPH1Q8NEM0 835 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SLC16A10Q8TF71 515 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 WNT8AQ9H1J5 351 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ATP6V0A4Q9HBG4 840 aa19.66■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DOCK1Q14185 1865 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 KIAA0391O15091 583 aaKnown RBP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PEX10O60683 326 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 BAG6P46379 1132 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FSTL1Q12841 308 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MKRN4PQ13434 485 aaPredicted RBP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SF3B2Q13435 895 aaKnown RBP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CCDC137Q6PK04 289 aaKnown RBP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ABHD15Q6UXT9 468 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TMEM143Q96AN5 459 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 IFT74Q96LB3 600 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CNOT8Q9UFF9 292 aaKnown RBP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 NOVA2Q9UNW9 492 aaKnown RBP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PTPN22Q9Y2R2 807 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FAM187AA6NFU0 413 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 A6NNZ2 444 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ACOT2P49753 483 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PRKG1Q13976 671 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 KRT71Q3SY84 523 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TUBB8Q3ZCM7 444 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 USP37Q86T82 979 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TRIM7Q9C029 511 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ARHGAP28Q9P2N2 729 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FAM169AQ9Y6X4 670 aa19.65■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PPFIA2O75334 1257 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CTNNA2P26232 953 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CHRNA3P32297 505 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 KCNJ1P48048 391 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 LIG4P49917 911 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ODF2Q5BJF6 829 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ACAD10Q6JQN1 1059 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ZDHHC24Q6UX98 284 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 RUFY4Q6ZNE9 571 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 TEX13BQ9BXU2 312 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ZNF112Q9UJU3 913 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ADAMTS5Q9UNA0 930 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ARID2Q68CP9 1835 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 PHIPQ8WWQ0 1821 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 TNNI1P19237 187 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 IFFO1Q0D2I5 559 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CLUL1Q15846 466 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 SPOPLQ6IQ16 392 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 LLGL2Q6P1M3 1020 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 TXLNGYQ9BZA5 131 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ACAD9Q9H845 621 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 PCDHA3Q9Y5H8 950 aa19.64■□□□□ 0.73
CHRFAM7A-202ENST00000397827 MYH9P35579 1960 aaKnown RBP19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 IRF6O14896 467 aa19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 DKC1O60832 514 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 GARTP22102 1010 aa19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 TMOD1P28289 359 aa19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 GTF2H1P32780 548 aa19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 RPL21P46778 160 aaKnown RBP19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 NLRP11P59045 1033 aaKnown RBP19.63■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CPA5Q8WXQ8 436 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms