RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 GCLMP48507 274 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 YARSP54577 528 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 DLG4P78352 724 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 MTFR1Q15390 333 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 MEA1Q16626 185 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 EEF1DP3Q658K8 133 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 SV2AQ7L0J3 742 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 ANKRD36BP1Q96IX9 119 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 TOX2Q96NM4 488 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 PPP1R16BQ96T49 567 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 FAM124BQ9H5Z6 455 aaPredicted RBP20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 PIN4Q9Y237 131 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 BZW2Q9Y6E2 419 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 PITPNM1O00562 1244 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 HARSP12081 509 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 ANXA13P27216 316 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 RAB27AP51159 221 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 ADKP55263 362 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 TRIM71Q2Q1W2 868 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 THNSL1Q8IYQ7 743 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 PLEKHO2Q8TD55 490 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 CPLX3Q8WVH0 158 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 CRACR2AQ9BSW2 395 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 IMPG2Q9BZV3 1241 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 INTS2Q9H0H0 1204 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 GANQ9H2C0 597 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 CDHR5Q9HBB8 845 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 RAB20Q9NX57 234 aa20.57■□□□□ 0.88
TSPAN4-204ENST00000397404 NOL4O94818 638 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 TNNC2P02585 160 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 ZSCAN20P17040 1043 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 ENOX2Q16206 610 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 WDR44Q5JSH3 913 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 FBXO47Q5MNV8 452 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 FAM228AQ86W67 206 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 CCDC170Q8IYT3 715 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 ZSWIM2Q8NEG5 633 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 U2AF1L4Q8WU68 220 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 TMEM40Q8WWA1 233 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 TAF4BQ92750 862 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 CPB2Q96IY4 423 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 SPAG5Q96R06 1193 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 STK33Q9BYT3 514 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 PDE11AQ9HCR9 933 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 TRMT13Q9NUP7 481 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 XPOTO43592 962 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 CHRNA1P02708 482 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 C4BPAP04003 597 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 HSPA1AP0DMV8 641 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 HSPA1BP0DMV9 641 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 SLC9A1P19634 815 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 GJA8P48165 433 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 LBX1P52954 281 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 POLR2FP61218 127 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 CCZ1BP86790 482 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 CCZ1P86791 482 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 GCNT1Q02742 428 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 ANKRD33Q7Z3H0 272 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 LMO3Q8TAP4 145 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 NT5C1BQ96P26 610 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 KCNF1Q9H3M0 494 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 KCND1Q9NSA2 647 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 AIPL1Q9NZN9 384 aa20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 NOC2LQ9Y3T9 749 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-204ENST00000397404 CSDE1O75534 798 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 TFRCP02786 760 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 TMEM191BP0C7N4 346 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 PAK2Q13177 524 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 PDXDC1Q6P996 788 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 FAM126BQ8IXS8 530 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 BAP1Q92560 729 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 FTHL17Q9BXU8 183 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 ST3GAL5Q9UNP4 418 aa20.55■□□□□ 0.88
TSPAN4-204ENST00000397404 CEP350Q5VT06 3117 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 CD4P01730 458 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 CKBP12277 381 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 TBXAS1P24557 533 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 TNFSF9P41273 254 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 KLK7P49862 253 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 MFAP3P55082 362 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 BIRC3Q13489 604 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 SFMBT2Q5VUG0 894 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 TWF2Q6IBS0 349 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 DPY19L2P1Q6NXN4 242 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 RRAGAQ7L523 313 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 TXLNBQ8N3L3 684 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 SIX2Q9NPC8 291 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 UBN1Q9NPG3 1134 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 R3HCC1Q9Y3T6 440 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-204ENST00000397404 CENPFP49454 3210 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 SSU72P8A0A1W2PR75 194 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 ESPNB1AK53 854 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 PHACTR2O75167 634 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 NPTXRO95502 500 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 ATICP31939 592 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 STAT1P42224 750 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 PTPN21Q16825 1174 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 ZBTB41Q5SVQ8 909 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms